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Information on SUBCLASS 3.26.1
Subclass Accession number: 4759
Subclass: 3.26.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 5.1 +/- 10.3
Average RMSD (Å) : 0.733 +/- 0.208

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: XXhXXhp
(φψ)-conformation: aabplaa
Pattern: [TVY][HST]xxx[GKL][FMY][ENP][AGR][IY][ES][DST]x
Conservation:-0.1370.261-1.199-1.066-0.668-1.5971.4560.128-0.2701.0401.6610.527-0.137
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ejd_A_3931ejd   A393405YHIDRGYERIEDKHHHHHHSSSHHHHaaaaaabxlaaaa
1q0b_A_2101q0b   A222234TTAATLMNAYSSRHHHHHHSTTHHHHaaaaaabplaaaa
1tyv_*_2361tyv   -236248VSDYVKFPGIETLHHHHHHTTTHHHHaaaaaabpvaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ejd_A_3931ejd   A     PO4PHOSPHATE ION Y - 393
1ejd_A_3931ejd   A     PO4PHOSPHATE ION H - 394
1ejd_A_3931ejd   A     PO4PHOSPHATE ION I - 395
1ejd_A_3931ejd   A     PO4PHOSPHATE ION R - 397
1ejd_A_3931ejd   A     PO4PHOSPHATE ION R - 401
1ejd_A_3931ejd   A     PO4PHOSPHATE ION E - 403
1ejd_A_3931ejd   A     PO4PHOSPHATE ION D - 404
1ejd_A_3931ejd   A     PO4PHOSPHATE ION R - 407
1q0b_A_2101q0b   A     NATETHYL 4-(3-HYDROXYPHENYL)-6-METHYL-2-THIOXO-1,2,3,4-TETRAHYDROPYRIMIDINE-5-CARBOXYLATE Y - 211
1q0b_A_2101q0b   A     NATETHYL 4-(3-HYDROXYPHENYL)-6-METHYL-2-THIOXO-1,2,3,4-TETRAHYDROPYRIMIDINE-5-CARBOXYLATE L - 214
1q0b_A_2101q0b   A     NATETHYL 4-(3-HYDROXYPHENYL)-6-METHYL-2-THIOXO-1,2,3,4-TETRAHYDROPYRIMIDINE-5-CARBOXYLATE E - 215
1q0b_A_2101q0b   A     NATETHYL 4-(3-HYDROXYPHENYL)-6-METHYL-2-THIOXO-1,2,3,4-TETRAHYDROPYRIMIDINE-5-CARBOXYLATE A - 218
1q0b_A_2101q0b   A     MGMAGNESIUM ION S - 232
1q0b_A_2101q0b   A     ADPADENOSINE-5'-DIPHOSPHATE S - 232
1q0b_A_2101q0b   A     ADPADENOSINE-5'-DIPHOSPHATE S - 233

Clusters included in this Subclass
CLUSTER: HH.2.224