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Information on SUBCLASS 3.28.1
Subclass Accession number: 4762
Subclass: 3.28.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.2 (>75 %)  2.2.1 (>75 %)  2.2.1.1
GO : GO:0004802 (>75 %)  GO:0005509 (>75 %)  GO:0016744 (>75 %)  
SCOP : 52921 (>75 %)  52922 (>75 %)  52923 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 23.5 +/- 21.3
Average RMSD (Å) : 0.525 +/- 0.250

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 0-45 rho (°): 0-45
Consensus Sequence: XhGFphX
(φψ)-conformation: aagpbaa
Pattern: [AT]xx[ILMV][AFY][EHK][AEF][FLY][G][FI][ST][GPV][DEP]x[FIV]x[ADE]
Conservation:0.329-0.954-0.8620.2870.0590.081-0.9600.5022.8101.0240.878-1.1200.153-0.9540.112-0.911-0.476
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gpu_A_6421gpu   A642658APEVFKFFGFTPEGVAEHHHHHHHTT-SHHHHHHaaaaaaaavxbaaaaaa
1itz_A_6541itz   A654670AGTIYKEYGITVESIIAHHHHHHHHT-SHHHHHHaaaaaaaavxbaaaaaa
1lml_*_2561lml   -263279THEMAHALGFSGPFFEDHHHHHHHTT-SHHHHHHaaaaaaaagxbaaaaaa
1qgd_A_6411qgd   A641657AELLFEEFGFTVDNVVAHHHHHHHTT-SHHHHHHaaaaaaaavxbaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lml_*_2561lml   *     ZNZINC ION H - 264
1lml_*_2561lml   *     ZNZINC ION E - 265
1lml_*_2561lml   *     ZNZINC ION H - 268
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1lml_*_2561lml   * ACTACTIVE SITE.H - 264
1lml_*_2561lml   * ACTACTIVE SITE.E - 265
1lml_*_2561lml   * ACTACTIVE SITE.H - 268

Clusters included in this Subclass
CLUSTER: HH.3.282
CLUSTER: HH.5.290