ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 3.34.1

Subclass Accession number: 4768
Subclass: 3.34.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
GO : GO:0005102 (>75 %) GO:0005125 (>75 %) GO:0005126 (>75 %) GO:0005146 (>75 %) GO:0008083 (>75 %)
SCOP : 47265 (>75 %) 47266 (>75 %) 47267 (>75 %)

Number of loops: 2

Average sequence ID (%) : 86.8 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 45-90

rho (°): 0-45

Consensus Sequence:	AQGEPFP
(φψ)-conformation:	aaepwaa

Pattern:	[L]	[M]	[N]	[Q]	[I]	[KR]	[NS]	[Q]	[L]	[A]	[Q]	[L]	[N]	[G]	[S]	[A]	[N]	[A]	[L]	[F]	[I]	x	[Y]	[Y]	[T]	[A]	[Q]	[G]	[E]	[P]	[F]	[P]	[N]	[N]	[LV]	[DE]	[K]	[L]
Conservation:	-0.625	0.123	0.872	0.123	-0.625	-1.000	-1.374	0.123	-0.625	-0.625	0.123	-0.625	0.872	0.872	-0.625	-0.625	0.872	-0.625	-0.625	0.872	-0.625	-2.871	1.620	1.620	0.123	-0.625	0.123	0.872	0.123	1.620	0.872	1.620	0.872	0.872	-1.748	-0.813	0.123	-0.625

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1lki_*_22	1lki	-	22	59	LMNQIKNQLAQLNGSANALFISYYTAQGEPFPNNVEKL	HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTSGGGHHHH	aaaaaaaaaaaaaaaaaaaaaaaaaaaepwaaaaaaaa
1pvh_B_22	1pvh	B	22	59	LMNQIRSQLAQLNGSANALFILYYTAQGEPFPNNLDKL	HHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTTTTHHHH	aaaaaaaaaaaaaaaaaaaaaaaaaaaepwaaaaaaaa

Clusters included in this Subclass