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Information on SUBCLASS 4.1.6
Subclass Accession number: 4775
Subclass: 4.1.6 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.3 +/- 14.5
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXGchpXp
(φψ)-conformation: aalabpaa
Pattern: x[IMV][KST][GKV][FLV][CW][DQT][DEK]x[V][AKQ][PST][G][KN][IMV][DT][AEK][NST][DEQ][AF][LV][ADQ]x[ATV]
Conservation:-1.3770.333-0.400-1.458-0.4001.985-0.5620.089-0.8881.392-0.562-0.4002.8580.5420.3330.441-0.5620.0080.415-0.0050.394-0.807-0.888-0.481
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jfb_A_2101jfb   A210233IISKLCTEQVKPGNIDKSDAVQIAHHHHHHHHTTTTTSS-HHHHHHHHaaaaaaaaaaaavabxaaaaaaaa
1kcx_A_3611kcx   A361384RMTVVWDKAVATGKMDENQFVAVTHHHHHHHHHTTTTSS-HHHHHHHHaaaaaaaaaaaavabxaaaaaaaa
1m53_A_4271m53   A428451EVKGFWQDYVQSGKVTATEFLDNVHHHHHHHHHTTTTSS-HHHHHHHHaaaaaaaaaaaavabxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 210
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 235
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 236
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 237
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 238
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 239
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 240
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 241
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 243
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 244
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 245
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 247
1jfb_A_2101jfb   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 248

Clusters included in this Subclass
CLUSTER: HH.7.182