Information on SUBCLASS 4.2.3 |
Subclass Accession number: 4779
Subclass: 4.2.3 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 28.1 +/- 35.2 Average RMSD (Å) : 1.000 +/- 0.436 Consensus geometry
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Consensus Sequence: | hXpPphhX |
(φψ)-conformation: | aabaapaa |
Pattern: | [AL] | [AY] | [R] | [GIM] | [IV] | [ALV] | [QY] | [KL] | [GNS] | [ATV] | [PS] | [IL] | [GLT] | [NY] | [IT] | [AT] | [RS] | [DQ] | [AQ] | [CK] | [ILV] | x | [HN] | [P] | [DST] | [AV] | [ALV] | [AS] | [LY] | [HKQ] | [ASV] | [KN] | x | [DN] | [AL] | [IT] | [AIY] | [DK] | x | [LM] | [QR] | [GQ] | [AL] | [LV] | [ST] | [GN] | [IV] | x | [CN] | [AR] | [AL] |
Conservation: | -0.576 | -0.191 | 2.446 | -1.622 | 1.144 | -0.751 | 0.409 | -0.836 | -0.169 | -0.654 | -0.065 | 0.714 | -1.816 | 0.048 | -0.406 | 0.126 | -0.304 | 0.568 | -0.304 | -0.313 | 0.412 | -0.836 | 1.508 | 4.190 | -0.460 | -0.146 | -0.751 | 0.284 | -0.065 | -0.169 | -0.944 | 0.466 | -0.836 | 1.168 | -0.576 | -0.304 | -1.235 | 0.138 | -1.041 | 0.896 | 0.726 | -0.292 | -0.576 | 0.284 | 0.454 | 0.738 | 1.144 | -1.006 | 0.263 | -0.304 | -0.576 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dow_A_209 | 1dow | A | 209 | 259 | AARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAA | HHHHHHHHHHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaabaaxaaaaaaaaaaaaaaaaaaaaaaaaa |
1lki_*_76 | 1lki | - | 83 | 133 | LYRMVAYLSASLTNITRDQKVLNPTAVSLQVKLNATIDVMRGLLSNVLCRL | HHHHHHHHHHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaabaaxaaaaaaaaaaaaaaaaaaaaaaaaa |
1pvh_B_76 | 1pvh | B | 83 | 133 | LYRIVVYLGTSLGNITRDQKILNPSALSLHSKLNATADILRGLLSNVLCRL | HHHHHHHHHHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaaaaabaaxaaaaaaaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dow_A_209 | 1dow | A | MSESELENOMETHIONINE | A - 209 |
1dow_A_209 | 1dow | A | MSESELENOMETHIONINE | A - 210 |
1dow_A_209 | 1dow | A | MSESELENOMETHIONINE | R - 211 |
1dow_A_209 | 1dow | A | MSESELENOMETHIONINE | G - 212 |
1dow_A_209 | 1dow | A | MSESELENOMETHIONINE | G - 254 |
1dow_A_209 | 1dow | A | MSESELENOMETHIONINE | I - 255 |
1dow_A_209 | 1dow | A | MSESELENOMETHIONINE | A - 258 |
1dow_A_209 | 1dow | A | MSESELENOMETHIONINE | A - 259 |
Clusters included in this Subclass |
CLUSTER: HH.3.297 |