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Information on SUBCLASS 4.4.1
Subclass Accession number: 4783
Subclass: 4.4.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 15.8 +/- 18.9
Average RMSD (Å) : 0.608 +/- 0.166

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XXcphXXp
(φψ)-conformation: aalappaa
Pattern: x[knqr][afgiklv]xx[ADGNR][ekqrt][ailv]x[dkpr][adegkrs][adegq]x[aegknq]
Conservation:-0.6901.119-1.678-0.562-0.7211.7660.3781.292-0.3421.0150.349-0.317-0.681-0.927
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
19hc_A_13919hc   A143156QKGIAGTLLPGDNEHHHHHT-S-HHHHHaaaaavaxxaaaaa
1b5l_*_411b5l   -4154EMVEGDQLQKDQAFHHHHHT-S-HHHHHaaaaavabxaaaaa
1duw_A_1391duw   A143156QQGIKGKLPPDQNEHHHHTT-S-HHHHHaaaaavaxxaaaaa
1dvk_A_1331dvk   A148161LQLRRNQLAPDLLIHHHHHT-S-HHHHHaaaaalaxxaaaaa
1e3m_A_3481e3m   A353366ARLALRTARPRDLAHHHHHT---HHHHHaaaaavapxaaaaa
1ewq_A_3321ewq   A337350TRLELGRASPKDLGHHHHTT---HHHHHaaaaavapxaaaaa
1hr6_B_3491hr6   B361374KRIKSGKISDAEVNHHHHTT---HHHHHaaaaavabxaaaaa
1hzf_A_11431hzf   A11621175EKASAGLLGAHAAAHHHHHT---HHHHHaaaaavaxxaaaaa
1lc0_A_2491lc0   A258271VQKLLDQVSAEDLAHHHHTT-S-HHHHHaaaaalabxaaaaa
1n45_A_321n45   A3548RNFQKGQVTRDGFKHHHHTT---HHHHHaaaaavaxbaaaaa
1ofw_A_1391ofw   A143156QKGINGTLLPGDNEHHHHHT-S-HHHHHaaaaavaxxaaaaa
1rcw_A_251rcw   A2841VKWSKGELTKEQLQHHHHTT---HHHHHaaaaavabxaaaaa
1tca_*_1421tca   -143156PLDALAVSAPSVWQHHHHTT-B-HHHHHaaaaavabxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
19hc_A_13919hc   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 142
19hc_A_13919hc   A     ACTACETATE ION E - 156
1duw_A_1391duw   A     GOLGLYCEROL M - 142
1e3m_A_3481e3m   A     MSESELENOMETHIONINE L - 348
1e3m_A_3481e3m   A     MSESELENOMETHIONINE E - 349
1e3m_A_3481e3m   A     MSESELENOMETHIONINE R - 350
1e3m_A_3481e3m   A     MSESELENOMETHIONINE I - 351
1e3m_A_3481e3m   A     MSESELENOMETHIONINE L - 352
1e3m_A_3481e3m   A     MSESELENOMETHIONINE L - 355
1e3m_A_3481e3m   A     MSESELENOMETHIONINE A - 360
1e3m_A_3481e3m   A     MSESELENOMETHIONINE R - 363
1e3m_A_3481e3m   A     MSESELENOMETHIONINE D - 364
1e3m_A_3481e3m   A     MSESELENOMETHIONINE L - 365
1e3m_A_3481e3m   A     MSESELENOMETHIONINE A - 366
1hzf_A_11431hzf   A     MSESELENOMETHIONINE L - 1169
1hzf_A_11431hzf   A     MSESELENOMETHIONINE G - 1170
1hzf_A_11431hzf   A     MSESELENOMETHIONINE A - 1171
1hzf_A_11431hzf   A     MSESELENOMETHIONINE A - 1174
1lc0_A_2491lc0   A     PO4PHOSPHATE ION L - 281
1lc0_A_2491lc0   A     PO4PHOSPHATE ION S - 285
1lc0_A_2491lc0   A     PO4PHOSPHATE ION Q - 288
1lc0_A_2491lc0   A     PO4PHOSPHATE ION K - 289
1n45_A_321n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 34
1n45_A_321n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 35
1n45_A_321n45   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 38
1rcw_A_251rcw   A     MSESELENOMETHIONINE T - 25
1rcw_A_251rcw   A     MSESELENOMETHIONINE F - 26
1rcw_A_251rcw   A     MSESELENOMETHIONINE Y - 27
1rcw_A_251rcw   A     MSESELENOMETHIONINE V - 28
1rcw_A_251rcw   A     MSESELENOMETHIONINE Y - 43
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ofw_A_1391ofw   A CC2GOL BINDING SITE FOR CHAIN AM - 142

Clusters included in this Subclass
CLUSTER: HH.3.138
CLUSTER: HH.4.81
CLUSTER: HH.5.59
CLUSTER: HH.6.65