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Information on SUBCLASS 4.7.5
Subclass Accession number: 4797
Subclass: 4.7.5 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004872 (>50 %)  GO:0004888 (>50 %)  
SCOP : 47161 (>50 %)  47170 (>50 %)  47171 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 24.1 +/- 31.1
Average RMSD (Å) : 0.833 +/- 0.321

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: cphXhhXX
(φψ)-conformation: aappppaa
Pattern: [LY][AI][QR][AR][AD][AIT]x[AY][AFK]x[FL][GK][NQS][IM][AKT][IP][CL][KP][AEK][CM]x[ADE][ANT][SV]x[N][IV]x[EN]
Conservation:0.145-0.2980.957-0.150-0.413-0.7770.7310.150-1.339-1.3390.685-0.127-0.0260.810-0.683-0.2610.4390.708-0.4950.725-0.964-0.401-0.589-0.708-1.3393.4441.379-0.9570.694
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1oyz_A_681oyz   A6896YIRRDIGAFILGQIKICKKCEDNVFNILNHHHHHHHHHHHHHS---TTTHHHHHHHHHaaaaaaaaaaaaaxxbpaaaaaaaaaaaa
2asr_*_862asr   -97125LAQAATHYKKFKSMAPLPEMVATSRNIDEHHHHHHHHHHHHHS---GGGHHHHHHHHHaaaaaaaaaaaaaxpxxaaaaaaaaaaaa
2lig_A_892lig   A97125LAQAAAHYANFKNMTPLPAMAEASANVDEHHHHHHHHHHHHHS---GGGHHHHHHHHHaaaaaaaaaaaaaxppxaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oyz_A_681oyz   A     MSESELENOMETHIONINE R - 71
1oyz_A_681oyz   A     MSESELENOMETHIONINE D - 72
1oyz_A_681oyz   A     MSESELENOMETHIONINE G - 74
1oyz_A_681oyz   A     MSESELENOMETHIONINE A - 75
1oyz_A_681oyz   A     MSESELENOMETHIONINE L - 78
1oyz_A_681oyz   A     MSESELENOMETHIONINE N - 93
1oyz_A_681oyz   A     MSESELENOMETHIONINE I - 94
1oyz_A_681oyz   A     MSESELENOMETHIONINE L - 95
1oyz_A_681oyz   A     MSESELENOMETHIONINE N - 96

Clusters included in this Subclass
CLUSTER: HH.6.110