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Information on SUBCLASS 4.10.2
Subclass Accession number: 4807
Subclass: 4.10.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 15.0 +/- 23.7
Average RMSD (Å) : 0.983 +/- 0.293

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXXppXXh
(φψ)-conformation: aalpabaa
Pattern: [an]xxx[EHQRS]x[alt]xxx[DGQS][dek][enty][aefk][ekp][AFLY]
Conservation:0.898-1.8080.1710.9881.085-0.514-0.037-0.7970.456-1.5190.9500.951-0.882-1.2461.0640.240
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a1v_A_5441a1v   A544559AHFLSQTKQSGENFPYHHHHHHHHHTT-SSHHaaaaaaaaaavpabaa
1cu1_A_5441cu1   A544559AHFLSQTKQAGDNFPYHHHHHHHHHH--S-HHaaaaaaaaaavpabaa
1dxy_*_1201dxy   -120135MGKVQAQLQAGDYEKAHHHHHHHHHTT-HHHHaaaaaaaaaavbaaaa
1hk8_A_1321hk8   A145160AKHIEDAEKWQIADALHHHHHHHHHTT-SSHHaaaaaaaaaalxaxaa
1ukf_A_1261ukf   A139154NDALRAALSNDDEAPFHHHHHHHHHTT-SSHHaaaaaaaaaalxabaa
2hgs_A_1602hgs   A161176AVHRHVLSVLSKTKEAHHHHHHHHHTT-HHHHaaaaaaaaaavbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a1v_A_5441a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE L - 547
1a1v_A_5441a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE K - 551
1a1v_A_5441a1v   A     CMES,S-(2-HYDROXYETHYL)THIOCYSTEINE Y - 559
1hk8_A_1321hk8   A     DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE K - 146
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hk8_A_1321hk8   A DG1DGT BINDING SITE FOR CHAIN AK - 146
1hk8_A_1321hk8   A DG1DGT BINDING SITE FOR CHAIN AK - 169

Clusters included in this Subclass
CLUSTER: HH.4.114
CLUSTER: HH.5.148