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Information on SUBCLASS 4.11.1
Subclass Accession number: 4809
Subclass: 4.11.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 13.4 +/- 19.1
Average RMSD (Å) : 1.050 +/- 0.239

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXXXhpXp
(φψ)-conformation: aabpbpaa
Pattern: x[QRSTW]xxx[aeqrt]x[dektw][flmv][CDNST][ekpqt][dehkt][ADEQR][LW]x[aekq]
Conservation:-1.2350.268-1.1550.103-1.132-0.240-1.363-0.5050.9420.706-0.106-0.0221.0532.366-0.3130.634
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a5t_*_1691a5t   -174189TWLSREVTMSQDALLAHHHHHH----HHHHHHaaaaaabbbxaaaaaa
1ef1_A_1551ef1   A155170QRVLEQHKLNKDQWEEHHHHHHS---HHHHHHaaaaaabxbxaaaaaa
1i27_A_4561i27   A460475RRYLTRKPMTTKDLLKHHHHHHS-B-HHHHHHaaaaaabwbxaaaaaa
1i6l_A_411i6l   A4156DQHAITVWQDPHELRQHHHHTTS---HHHHHHaaaaaabpbxaaaaaa
1j19_A_1551j19   A155170QRVLEQHKLTKEQWEEHHHHHHS---HHHHHHaaaaaabxbxaaaaaa
1kiy_A_501kiy   A5065PRQQQLLKVDPKRLQAHHHHHH----HHHHHHaaaaaaxxbxaaaaaa
1m44_A_181m44   A2843VTGAFAGDFTETDWEHHHHH-SS---HHHHHHaaaaxaxxxxaaaaaa
1smt_A_461smt   A5267LSLLARSELCVGDLAQHHHHTT--B-HHHHHHaaaaaabxbxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i27_A_4561i27   A     ZNZINC ION P - 467
1i27_A_4561i27   A     ZNZINC ION M - 468
1i27_A_4561i27   A     ZNZINC ION T - 469
1i27_A_4561i27   A     ZNZINC ION D - 472
1i6l_A_411i6l   A     MSESELENOMETHIONINE H - 43
1i6l_A_411i6l   A     TYMTRYPTOPHANYL-5'AMP H - 43
1i6l_A_411i6l   A     GOLGLYCEROL P - 51
1i6l_A_411i6l   A     GOLGLYCEROL H - 52
1i6l_A_411i6l   A     GOLGLYCEROL R - 55
1i6l_A_411i6l   A     MSESELENOMETHIONINE Q - 56
1i6l_A_411i6l   A     GOLGLYCEROL Q - 56
1i6l_A_411i6l   A     GOLGLYCEROL N - 57
1i6l_A_411i6l   A     MSESELENOMETHIONINE R - 59
1i6l_A_411i6l   A     GOLGLYCEROL R - 59
1i6l_A_411i6l   A     MSESELENOMETHIONINE R - 60
1i6l_A_411i6l   A     GOLGLYCEROL R - 60
1i6l_A_411i6l   A     GOLGLYCEROL L - 61
1i6l_A_411i6l   A     MSESELENOMETHIONINE A - 63
1i6l_A_411i6l   A     GOLGLYCEROL L - 64
1kiy_A_501kiy   A     EDO1,2-ETHANEDIOL L - 55
1kiy_A_501kiy   A     EDO1,2-ETHANEDIOL L - 56
1kiy_A_501kiy   A     EDO1,2-ETHANEDIOL K - 57
1kiy_A_501kiy   A     EDO1,2-ETHANEDIOL V - 58
1kiy_A_501kiy   A     EDO1,2-ETHANEDIOL T - 69
1kiy_A_501kiy   A     EDO1,2-ETHANEDIOL I - 70
1kiy_A_501kiy   A     EDO1,2-ETHANEDIOL M - 73

Clusters included in this Subclass
CLUSTER: HH.3.134
CLUSTER: HH.5.89