Information on SUBCLASS 4.12.3 |
Subclass Accession number: 4814
Subclass: 4.12.3 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.7 +/- 15.7 Average RMSD (Å) : 0.700 +/- 0.100 Consensus geometry
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Consensus Sequence: | phpGpXpX |
(φψ)-conformation: | aapgppaa |
Pattern: | [IKV] | x | [DES] | [AL] | x | [ANR] | [EKQ] | [LWY] | [EK] | [G] | [KT] | [GS] | [KSY] | [EG] | x | [AFL] | [KLM] |
Conservation: | -0.668 | -0.924 | 0.183 | -0.111 | -0.924 | -0.668 | 0.524 | 0.268 | 0.989 | 3.163 | 0.307 | 0.419 | -0.754 | 0.032 | -0.668 | -0.754 | -0.413 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eyq_A_58 | 1eyq | A | 59 | 75 | VASLAAKWKGKSSEELL | HHHHHHHHTT--HHHHH | aaaaaaaaxvxxaaaaa |
1hb6_A_49 | 1hb6 | A | 54 | 70 | KWDAWNELKGTSKEDAM | HHHHHHHTTT--HHHHH | aaaaaaaapgxxaaaaa |
1i6l_A_253 | 1i6l | A | 253 | 269 | IEELERQYEGKGYGVFK | HHHHHHHTTT--HHHHH | aaaaaaaapvxxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i6l_A_253 | 1i6l | A | MSESELENOMETHIONINE | R - 286 |
1i6l_A_253 | 1i6l | A | MSESELENOMETHIONINE | Y - 287 |
1i6l_A_253 | 1i6l | A | GOLGLYCEROL | Y - 287 |
1i6l_A_253 | 1i6l | A | MSESELENOMETHIONINE | H - 288 |
1i6l_A_253 | 1i6l | A | MSESELENOMETHIONINE | H - 289 |
Clusters included in this Subclass |
CLUSTER: HH.4.253 |