Information on SUBCLASS 4.15.1 |
Subclass Accession number: 4820
Subclass: 4.15.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 13.3 +/- 15.6 Average RMSD (Å) : 0.783 +/- 0.286 Consensus geometry
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Consensus Sequence: | hXpXXphX |
(φψ)-conformation: | aaplbpaa |
Pattern: | x | [aftv] | x | [ACFLM] | [gikl] | [KNQRS] | x | [fktv] | [NST] | [gilpv] | [AEKT] | [EMR] | [AIY] | [arst] | [dknp] | [ILMTV] |
Conservation: | -0.600 | -0.510 | 0.220 | 0.229 | -1.210 | 1.048 | -1.262 | -0.829 | 2.302 | -1.376 | 0.336 | 0.650 | 0.307 | -0.436 | -0.060 | 1.191 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fs1_B_113 | 1fs1 | B | 123 | 138 | VANMIKGKTPEEIRKT | HHHHHTT--HHHHHHH | aaaaapvbbaaaaaaa |
1i4j_A_14 | 1i4j | A | 20 | 35 | VVDLIRGKSLEEARNI | HHHHHTT-BHHHHHHH | aaaaapvxxaaaaaaa |
1m3q_A_137 | 1m3q | A | 143 | 158 | SFICSSNNNIARITGM | HHHHHTT--HHHHHHH | aaaaaplbbaaaaaaa |
1mpg_A_113 | 1mpg | A | 119 | 134 | RAILGQLVSVAMAAKL | HHHHTTTS-HHHHHHH | aaaaaxUbxaaaaaaa |
1ngn_A_430 | 1ngn | A | 436 | 451 | ATIFLNRTSGKMAIPV | HHHHHTTS-HHHHHHH | aaaaapvbxaaaaaaa |
1qr0_A_116 | 1qr0 | A | 116 | 131 | LEIAKRFFSKTEYSDL | HHHHSSSS-HHHHHHH | axgaabNbxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m3q_A_137 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | F - 144 |
1m3q_A_137 | 1m3q | A | ANG8-AMINOGUANINE | F - 144 |
1m3q_A_137 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | S - 147 |
1m3q_A_137 | 1m3q | A | ANG8-AMINOGUANINE | S - 147 |
1m3q_A_137 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | S - 148 |
1m3q_A_137 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | N - 149 |
1m3q_A_137 | 1m3q | A | CACALCIUM ION | N - 149 |
1m3q_A_137 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | N - 150 |
1m3q_A_137 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | N - 151 |
1m3q_A_137 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | I - 152 |
1m3q_A_137 | 1m3q | A | ANG8-AMINOGUANINE | I - 152 |
1m3q_A_137 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | A - 153 |
1m3q_A_137 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | I - 155 |
1m3q_A_137 | 1m3q | A | ANG8-AMINOGUANINE | I - 155 |
Clusters included in this Subclass |
CLUSTER: HH.4.111 |