Information on SUBCLASS 4.15.2 |
Subclass Accession number: 4821
Subclass: 4.15.2 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 48149 (>75 %) 48150 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 21.0 +/- 23.4 Average RMSD (Å) : 0.860 +/- 0.195 Consensus geometry
|
Consensus Sequence: | LXXXhXpX |
(φψ)-conformation: | aaplbpaa |
Pattern: | [AGIL] | x | [lv] | [L] | [CST] | [AKQ] | [GNQ] | [acfy] | [KPT] | [des] | x | x | [AVY] | [knt] | [KY] | [almv] | [hnt] | [aefk] | [cknr] | x |
Conservation: | -0.940 | -0.950 | 0.186 | 3.293 | 1.021 | 0.279 | 0.391 | -0.682 | 0.398 | -0.386 | 0.186 | -0.607 | 0.205 | -0.647 | 0.991 | -0.414 | -0.639 | -1.039 | -0.860 | 0.216 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cki_A_242 | 1cki | A | 242 | 261 | IEVLCKGYPSEFATYLNFCR | HHHHTTTS-HHHHHHHHHHH | aaaaapvbpaaaaaaaaaaa |
1csn_*_242 | 1csn | - | 242 | 261 | LRELCAGFPEEFYKYMHYAR | HHHHTTTS-HHHHHHHHHHH | aaaaapvbpaaaaaaaaaaa |
1orn_A_30 | 1orn | A | 36 | 55 | AVVLSAQCTDALVNKVTKRL | HHHHHTTS-HHHHHHHHHHH | aaaaaplbxaaaaaaaaaaa |
1pu6_A_31 | 1pu6 | A | 36 | 55 | GAVLTQNTKFEAVLKSLENL | HHHHTTTS-HHHHHHHHHHH | aaaaapvbbaaaaaaaaaaa |
2abk_*_29 | 2abk | - | 35 | 54 | AVLLSAQATDVSVNKATAKL | HHHHTTTS-HHHHHHHHHHH | aaaaaplbxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1orn_A_30 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | V - 37 |
1orn_A_30 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | S - 40 |
1orn_A_30 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | A - 41 |
1orn_A_30 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | Q - 42 |
1orn_A_30 | 1orn | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | Q - 42 |
1orn_A_30 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | C - 43 |
1orn_A_30 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | T - 44 |
1orn_A_30 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | D - 45 |
1orn_A_30 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | A - 46 |
1pu6_A_31 | 1pu6 | A | SEO2-MERCAPTOETHANOL | G - 36 |
1pu6_A_31 | 1pu6 | A | SEO2-MERCAPTOETHANOL | T - 40 |
1pu6_A_31 | 1pu6 | A | SEO2-MERCAPTOETHANOL | F - 45 |
Clusters included in this Subclass |
CLUSTER: HH.4.169 |
CLUSTER: HH.6.104 |