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Information on SUBCLASS 4.17.2
Subclass Accession number: 4824
Subclass: 4.17.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 63.8 +/- -12.3
Average RMSD (Å) : 0.167 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pEYQLXDX
(φψ)-conformation: aabbbpaa
Pattern: [ES][G][IV][QR][A][C][FY][DEN][R][AS][NRS][E][Y][Q][L]x[D][CS][A][AGQ][Y][FY][L]
Conservation:-0.9710.919-0.324-0.571-0.0812.4200.278-0.8040.419-0.810-1.2490.4191.4200.419-0.081-1.5110.919-0.814-0.081-1.5821.4200.328-0.081
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1azs_C_1571azs   C157179EGVRACYERSNEYQLIDCAQYFLHHHHHHHTTGGGS---TTHHHHHaaaaaaaaaaaabbbxaaaaaaa
1cip_A_1341cip   A134156SGVQACFNRSREYQLNDSAAYYLHHHHHHHTTGGGS---TTHHHHHaaaaaaaaaaaabbbxaaaaaaa
1tad_A_1301tad   A130152SGIQACFDRASEYQLNDSAGYYLHHHHHHHHTGGGS---TTHHHHHaaaaaaaaaaaabbbpaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1azs_C_1571azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE D - 173
1azs_C_1571azs   C     GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE C - 174
1cip_A_1341cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER N - 149
1cip_A_1341cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER D - 150
1cip_A_1341cip   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER S - 151
1tad_A_1301tad   A     GDPGUANOSINE-5'-DIPHOSPHATE N - 145
1tad_A_1301tad   A     GDPGUANOSINE-5'-DIPHOSPHATE D - 146
1tad_A_1301tad   A     GDPGUANOSINE-5'-DIPHOSPHATE S - 147

Clusters included in this Subclass
CLUSTER: HH.10.68