Information on SUBCLASS 4.17.2 |
Subclass Accession number: 4824
Subclass: 4.17.2 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 63.8 +/- -12.3 Average RMSD (Å) : 0.167 +/- 0.058 Consensus geometry
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Consensus Sequence: | pEYQLXDX |
(φψ)-conformation: | aabbbpaa |
Pattern: | [ES] | [G] | [IV] | [QR] | [A] | [C] | [FY] | [DEN] | [R] | [AS] | [NRS] | [E] | [Y] | [Q] | [L] | x | [D] | [CS] | [A] | [AGQ] | [Y] | [FY] | [L] |
Conservation: | -0.971 | 0.919 | -0.324 | -0.571 | -0.081 | 2.420 | 0.278 | -0.804 | 0.419 | -0.810 | -1.249 | 0.419 | 1.420 | 0.419 | -0.081 | -1.511 | 0.919 | -0.814 | -0.081 | -1.582 | 1.420 | 0.328 | -0.081 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1azs_C_157 | 1azs | C | 157 | 179 | EGVRACYERSNEYQLIDCAQYFL | HHHHHHHTTGGGS---TTHHHHH | aaaaaaaaaaaabbbxaaaaaaa |
1cip_A_134 | 1cip | A | 134 | 156 | SGVQACFNRSREYQLNDSAAYYL | HHHHHHHTTGGGS---TTHHHHH | aaaaaaaaaaaabbbxaaaaaaa |
1tad_A_130 | 1tad | A | 130 | 152 | SGIQACFDRASEYQLNDSAGYYL | HHHHHHHHTGGGS---TTHHHHH | aaaaaaaaaaaabbbpaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1azs_C_157 | 1azs | C | GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE | D - 173 |
1azs_C_157 | 1azs | C | GSP5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE | C - 174 |
1cip_A_134 | 1cip | A | GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | N - 149 |
1cip_A_134 | 1cip | A | GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | D - 150 |
1cip_A_134 | 1cip | A | GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | S - 151 |
1tad_A_130 | 1tad | A | GDPGUANOSINE-5'-DIPHOSPHATE | N - 145 |
1tad_A_130 | 1tad | A | GDPGUANOSINE-5'-DIPHOSPHATE | D - 146 |
1tad_A_130 | 1tad | A | GDPGUANOSINE-5'-DIPHOSPHATE | S - 147 |
Clusters included in this Subclass |
CLUSTER: HH.10.68 |