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Information on SUBCLASS 4.19.1
Subclass Accession number: 4828
Subclass: 4.19.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 35.7 +/- 34.5
Average RMSD (Å) : 0.630 +/- 0.309

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XpGXXXhh
(φψ)-conformation: aagpppaa
Pattern: [akl][adeqs]xx[deq][gk][ikv]x[lt][apvy]xx[adrt]
Conservation:-0.0670.407-0.753-0.8030.4952.4250.482-0.4161.217-0.359-1.115-0.550-0.963
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
16pk_*_39816pk   -402414LELLEGKTLPGVTHHHHTT---HHHHaaaaavxxbaaaa
1hdi_A_3951hdi   A399411LELLEGKVLPGVDHHHHTT---HHHHaaaaavxxxaaaa
1oao_A_311oao   A3951KSKDDKVITAFDRHHHHHT---HHHHaaaaalbxbaaaa
1on3_A_331on3   A3850KQHSQGKQTARERHHHHTT---HHHHaaaaavbxxaaaa
1php_*_3741php   -377389LEFMEGKQLPGVVHHHHTT---HHHHaaaaagxxxaaaa
1qpg_*_3941qpg   -397409LELLEGKELPGVAHHHHTS---HHHHaaaaagpbxaaaa
1rqj_A_2621rqj   A262274ADQQLGKSTYPALHHHHHT---HHHHaaaaavpxbaaaa
1su8_A_111su8   A1931KAKREGIQTVWDRHHHHHT---HHHHaaaaavxxbaaaa
1vjd_A_3951vjd   A399411LELLEGKVLPGVDHHHHHT---HHHHaaaaagxxxaaaa
1vpe_*_3761vpe   -380392LEFLEGKELPGIAHHHHTSS--HHHHaaaaagxxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
16pk_*_39816pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER G - 398
16pk_*_39816pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER G - 399
16pk_*_39816pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER A - 400
16pk_*_39816pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER S - 401
16pk_*_39816pk   *     BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER L - 402
1hdi_A_3951hdi   A     3PG3-PHOSPHOGLYCERIC ACID G - 395
1hdi_A_3951hdi   A     3PG3-PHOSPHOGLYCERIC ACID G - 396
1hdi_A_3951hdi   A     3PG3-PHOSPHOGLYCERIC ACID A - 397
1oao_A_311oao   A     GOLGLYCEROL K - 44
1oao_A_311oao   A     GOLGLYCEROL V - 45
1oao_A_311oao   A     GOLGLYCEROL I - 46
1oao_A_311oao   A     GOLGLYCEROL T - 47
1oao_A_311oao   A     GOLGLYCEROL R - 51
1on3_A_331on3   A     MCAMETHYLMALONYL-COENZYME A R - 34
1on3_A_331on3   A     MCAMETHYLMALONYL-COENZYME A R - 35
1on3_A_331on3   A     MCAMETHYLMALONYL-COENZYME A K - 38
1on3_A_331on3   A     MCAMETHYLMALONYL-COENZYME A Q - 42
1on3_A_331on3   A     MCAMETHYLMALONYL-COENZYME A K - 44
1php_*_3741php   *     ADPADENOSINE-5'-DIPHOSPHATE L - 377
1qpg_*_3941qpg   *     MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE L - 397
1rqj_A_2621rqj   A     MGMAGNESIUM ION D - 263
1rqj_A_2621rqj   A     RIS1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID D - 263
1rqj_A_2621rqj   A     MGMAGNESIUM ION K - 268
1rqj_A_2621rqj   A     RIS1-HYDROXY-2-(3-PYRIDINYL)ETHYLIDENE BIS-PHOSPHONIC ACID K - 268
1vjd_A_3951vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE G - 395
1vjd_A_3951vjd   A     ATPADENOSINE-5'-TRIPHOSPHATE L - 399
1vpe_*_3761vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 376
1vpe_*_3761vpe   *     3PG3-PHOSPHOGLYCERIC ACID G - 376
1vpe_*_3761vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER G - 377
1vpe_*_3761vpe   *     3PG3-PHOSPHOGLYCERIC ACID G - 377
1vpe_*_3761vpe   *     3PG3-PHOSPHOGLYCERIC ACID A - 378
1vpe_*_3761vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER L - 380
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oao_A_311oao   A BC3GOL BINDING SITE FOR CHAIN AI - 46

Clusters included in this Subclass
CLUSTER: HH.4.73