Information on SUBCLASS 4.30.1 |
Subclass Accession number: 4839
Subclass: 4.30.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 5.1 +/- 6.1 Average RMSD (Å) : 0.833 +/- 0.153 Consensus geometry
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Consensus Sequence: | pXXXhXXX |
(φψ)-conformation: | aababpaa |
Pattern: | [ANS] | x | x | [AFK] | [EKS] | [AER] | x | [ACT] | [KSY] | [GKR] | [CKT] | [EGK] | [IM] | [PST] | x | x | [EQY] | [AV] | x | [AV] | x | [AEF] | x | x | [EKL] | [ARS] |
Conservation: | 0.643 | -1.295 | -1.892 | -0.997 | 0.941 | 0.046 | -0.550 | 0.941 | -0.252 | 0.345 | -0.103 | 0.046 | 2.285 | 0.643 | -1.146 | -0.252 | 0.792 | 1.526 | 0.345 | 1.526 | -1.146 | -0.997 | -0.095 | -0.997 | -0.550 | 0.195 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1iqv_A_157 | 1iqv | A | 169 | 194 | ALGASAKCYRTKMSFAEALAEEIILA | HHHHHHHHHHSSS-HHHHHHHHHHHH | aaaaaaaaaababxaaaaaaaaaaaa |
1le8_A_97 | 1le8 | A | 97 | 122 | SKEKEEVAKKCGITPLQVRVWFINKR | HHHHHHHHHHTTS-HHHHHHHHHHHH | aaaaaaaaaaxabxaaaaaaaaaaaa |
1qsa_A_454 | 1qsa | A | 454 | 479 | NDLFKRYTSGKEIPQSYAMAIARQES | HHHHHHHHTTSSS-HHHHHHHHHHHH | aaaaaaaaaabaxxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qsa_A_454 | 1qsa | A | GOLGLYCEROL | S - 469 |
1qsa_A_454 | 1qsa | A | GOLGLYCEROL | E - 478 |
Clusters included in this Subclass |
CLUSTER: HH.5.272 |