Information on SUBCLASS 4.32.1 |
Subclass Accession number: 4842
Subclass: 4.32.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 24.2 +/- 22.3 Average RMSD (Å) : 0.667 +/- 0.121 Consensus geometry
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Consensus Sequence: | pXppPhXX |
(φψ)-conformation: | aaGbppaa |
Pattern: | [dkpqs] | x | [AILV] | [FILTV] | [EKS] | [AQR] | [ALM] | [aekt] | [AKS] | [AFIV] | x | [gr] | [hqsty] | [ENST] | [tvwy] | [ST] | [CNS] | [PV] | [CDPV] | [AST] | [fhiy] | [AGI] | [AQ] | [KRSWY] | [AGIV] | [ATV] | [AIL] | [AEKT] | [AILT] | [LY] |
Conservation: | -1.427 | -1.669 | 0.628 | -0.122 | 0.540 | 0.063 | 1.155 | -0.949 | 0.776 | 0.122 | -1.105 | -0.100 | -1.050 | 0.378 | -1.000 | 1.632 | 0.889 | 2.753 | -1.081 | 0.846 | -0.534 | -0.435 | 0.598 | -0.890 | -0.765 | 0.202 | 0.116 | -0.395 | -0.445 | 1.270 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b5p_A_250 | 1b5p | A | 250 | 279 | KEVIKAMASVSRQSTTSPDTIAQWATLEAL | HHHHHHHHHHHHTTT-S--HHHHHHHHHHH | aaaaaaaaaaaaaaaGbxpaaaaaaaaaaa |
1gde_A_249 | 1gde | A | 249 | 278 | SWIIERMVKFQMYNATCPVTFIQYAAAKAL | HHHHHHHHHHHHTTT-S--HHHHHHHHHHH | aaaaaaaaaaaaaFaGbxxaaaaaaaaaaa |
1j32_A_253 | 1j32 | A | 253 | 282 | VPLVKAATKIQGHSTSNVCTFAQYGAIAAY | HHHHHHHHHHHHTTT-S--HHHHHHHHHHH | aaaaaaaaaaaaaaaexxpaaaaaaaaaaa |
1qis_A_277 | 1qis | A | 281 | 310 | DRAFSQMKAAIRANYSNPPAHGASVVATIL | HHHHHHHHHHHHTTTSS--HHHHHHHHHHH | aaaaaaaaaaaaaaaGbxxaaaaaaaaaaa |
1yaa_A_276 | 1yaa | A | 281 | 310 | PAVTSQLAKIIRSEVSNPPAYGAKIVAKLL | HHHHHHHHHHHHTTTSS--HHHHHHHHHHH | aaaaaaaaaaaaaaaGbxpaaaaaaaaaaa |
2cst_A_277 | 2cst | A | 281 | 310 | QRVLSQMEKIVRTTWSNPPSQGARIVATTL | HHHHHHHHHHHHTTTSS--SHHHHHHHHHH | aaaaaaaaaaaaaaaGbxxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b5p_A_250 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 263 |
1b5p_A_250 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 264 |
1b5p_A_250 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 265 |
1gde_A_249 | 1gde | A | PLPPYRIDOXAL-5'-PHOSPHATE | N - 262 |
1gde_A_249 | 1gde | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 263 |
1gde_A_249 | 1gde | A | GLUGLUTAMIC ACID | T - 264 |
1gde_A_249 | 1gde | A | GLUGLUTAMIC ACID | C - 265 |
1j32_A_253 | 1j32 | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 267 |
1j32_A_253 | 1j32 | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 268 |
1yaa_A_276 | 1yaa | A | MAEMALEIC ACID | R - 292 |
1yaa_A_276 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | V - 295 |
1yaa_A_276 | 1yaa | A | MAEMALEIC ACID | S - 296 |
1yaa_A_276 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 296 |
1yaa_A_276 | 1yaa | A | MAEMALEIC ACID | N - 297 |
1yaa_A_276 | 1yaa | A | PLPPYRIDOXAL-5'-PHOSPHATE | N - 297 |
2cst_A_277 | 2cst | A | PLPPYRIDOXAL-5'-PHOSPHATE | W - 295 |
Clusters included in this Subclass |
CLUSTER: HH.7.31 |