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Information on SUBCLASS 4.32.1
Subclass Accession number: 4842
Subclass: 4.32.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 24.2 +/- 22.3
Average RMSD (Å) : 0.667 +/- 0.121

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pXppPhXX
(φψ)-conformation: aaGbppaa
Pattern: [dkpqs]x[AILV][FILTV][EKS][AQR][ALM][aekt][AKS][AFIV]x[gr][hqsty][ENST][tvwy][ST][CNS][PV][CDPV][AST][fhiy][AGI][AQ][KRSWY][AGIV][ATV][AIL][AEKT][AILT][LY]
Conservation:-1.427-1.6690.628-0.1220.5400.0631.155-0.9490.7760.122-1.105-0.100-1.0500.378-1.0001.6320.8892.753-1.0810.846-0.534-0.4350.598-0.890-0.7650.2020.116-0.395-0.4451.270
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b5p_A_2501b5p   A250279KEVIKAMASVSRQSTTSPDTIAQWATLEALHHHHHHHHHHHHTTT-S--HHHHHHHHHHHaaaaaaaaaaaaaaaGbxpaaaaaaaaaaa
1gde_A_2491gde   A249278SWIIERMVKFQMYNATCPVTFIQYAAAKALHHHHHHHHHHHHTTT-S--HHHHHHHHHHHaaaaaaaaaaaaaFaGbxxaaaaaaaaaaa
1j32_A_2531j32   A253282VPLVKAATKIQGHSTSNVCTFAQYGAIAAYHHHHHHHHHHHHTTT-S--HHHHHHHHHHHaaaaaaaaaaaaaaaexxpaaaaaaaaaaa
1qis_A_2771qis   A281310DRAFSQMKAAIRANYSNPPAHGASVVATILHHHHHHHHHHHHTTTSS--HHHHHHHHHHHaaaaaaaaaaaaaaaGbxxaaaaaaaaaaa
1yaa_A_2761yaa   A281310PAVTSQLAKIIRSEVSNPPAYGAKIVAKLLHHHHHHHHHHHHTTTSS--HHHHHHHHHHHaaaaaaaaaaaaaaaGbxpaaaaaaaaaaa
2cst_A_2772cst   A281310QRVLSQMEKIVRTTWSNPPSQGARIVATTLHHHHHHHHHHHHTTTSS--SHHHHHHHHHHaaaaaaaaaaaaaaaGbxxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b5p_A_2501b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 263
1b5p_A_2501b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 264
1b5p_A_2501b5p   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 265
1gde_A_2491gde   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 262
1gde_A_2491gde   A     PLPPYRIDOXAL-5'-PHOSPHATE A - 263
1gde_A_2491gde   A     GLUGLUTAMIC ACID T - 264
1gde_A_2491gde   A     GLUGLUTAMIC ACID C - 265
1j32_A_2531j32   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 267
1j32_A_2531j32   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 268
1yaa_A_2761yaa   A     MAEMALEIC ACID R - 292
1yaa_A_2761yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE V - 295
1yaa_A_2761yaa   A     MAEMALEIC ACID S - 296
1yaa_A_2761yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 296
1yaa_A_2761yaa   A     MAEMALEIC ACID N - 297
1yaa_A_2761yaa   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 297
2cst_A_2772cst   A     PLPPYRIDOXAL-5'-PHOSPHATE W - 295

Clusters included in this Subclass
CLUSTER: HH.7.31