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Information on SUBCLASS 4.34.1
Subclass Accession number: 4845
Subclass: 4.34.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 40.7 +/- 28.3
Average RMSD (Å) : 0.340 +/- 0.114

Consensus geometry
d (Å): 15 delta (°): 0-45 theta (°): 45-90 rho (°): 0-45
Consensus Sequence: XXhEGppp
(φψ)-conformation: aaplMpaa
Pattern: [AIV][AEP][KNR][HILY][MY][r][DT][AF][KRT][IP][ty][CEQ][IT][FY][EG][G][ET][ANS][EQT][IV][MQ]x[ILM][iv][ITV][AG][GR][aef][HL]
Conservation:-0.041-0.7480.194-0.9750.402-0.6740.548-0.456-0.158-0.737-0.927-0.700-0.1762.5290.1473.3070.186-0.204-0.2071.2050.566-0.6920.561-0.699-0.2500.370-0.257-1.478-0.633
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1buc_A_3531buc   A353381VARHMRDAKITQIYEGTNEVQLMVTGGALHHHHHHHHGGGGTTTS-HHHHHHHHHHHHaaaaaaaaaaaaaxvepaaaaaaaaaaaa
1egd_A_3621egd   A362390VEKLMRDAKIYQIYGGTSQIQRLIVAREHHHHHHHHHGGGGTTTS-HHHHHHHHHHHHaaaaaaaaaaaaaxvMpaaaaaaaaaaaa
1is2_A_4071is2   A407435IPNIYVTFTPACTFEGENTVMMLQTARFLHHHHHHHHGGGGTTTS-HHHHHHHHHHHHaaaaaaaaaaaaaxlMpaaaaaaaaaaaa
1jqi_A_3541jqi   A354382AERYYRDARITEIYEGTSEIQRLVIAGHLHHHHHHHHGGGGTTTS-HHHHHHHHHHHHaaaaaaaaaaaaaxvexaaaaaaaaaaaa
3mdd_A_3623mdd   A362390VEKLMRDAKIYQIYEGTAQIQRIIIAREHHHHHHHHHGGGGTSSS-HHHHHHHHHHHHaaaaaaaaaaaaaxlMpaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 362
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 365
1buc_A_3531buc   A     CAAACETOACETYL-COENZYME A I - 365
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 366
1buc_A_3531buc   A     CAAACETOACETYL-COENZYME A Y - 366
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 367
1buc_A_3531buc   A     CAAACETOACETYL-COENZYME A E - 367
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 368
1buc_A_3531buc   A     CAAACETOACETYL-COENZYME A G - 368
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 369
1buc_A_3531buc   A     CAAACETOACETYL-COENZYME A T - 369
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 370
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 371
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 372
1buc_A_3531buc   A     CAAACETOACETYL-COENZYME A V - 372
1buc_A_3531buc   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 375
1buc_A_3531buc   A     CAAACETOACETYL-COENZYME A M - 375
1buc_A_3531buc   A     CAAACETOACETYL-COENZYME A V - 376
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 371
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 374
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 375
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 376
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 377
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 378
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 379
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 380
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 381
1egd_A_3621egd   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 384
1is2_A_4071is2   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 416
1is2_A_4071is2   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 419
1is2_A_4071is2   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 420
1is2_A_4071is2   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 422
1is2_A_4071is2   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 423
1is2_A_4071is2   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 424
1is2_A_4071is2   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 425
1is2_A_4071is2   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 426
1is2_A_4071is2   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 429
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 363
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A I - 366
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 366
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A Y - 367
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 367
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A E - 368
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 368
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A G - 369
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 369
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A T - 370
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 370
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 371
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 372
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A I - 373
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 373
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A Q - 374
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A L - 376
1jqi_A_3541jqi   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 376
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A V - 377
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A H - 381
1jqi_A_3541jqi   A     CAAACETOACETYL-COENZYME A R - 384
3mdd_A_3623mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 373
3mdd_A_3623mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 376
3mdd_A_3623mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 379
3mdd_A_3623mdd   A     FADFLAVIN-ADENINE DINUCLEOTIDE I - 384
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1egd_A_3621egd   A CA1CATALYTIC BASE IN CHAIN AG - 376

Clusters included in this Subclass
CLUSTER: HH.8.22