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Information on SUBCLASS 4.47.1
Subclass Accession number: 4858
Subclass: 4.47.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 17.6 +/- 15.4
Average RMSD (Å) : 0.800 +/- 0.200

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXXpGXhh
(φψ)-conformation: aapplpaa
Pattern: xx[EQW]x[GQ][AT][ST][G][GS][AV][AGL][EST][QRT][AL]xx[DGN]
Conservation:-0.935-1.019-0.176-0.2600.0520.5150.8633.1130.8580.201-1.104-0.260-0.345-0.130-0.851-0.5980.077
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1he1_A_1811he1   A181197LQQWGTTGGAASQLVLDHHHHT-SSSHHHHHHHHaaaaabbvbaaaaaaaa
1nm8_A_391nm8   A4965VDEFQASGGVGERLQKGHHHHHSTTSHHHHHHHHaaaaappvxaaaaaaaa
1tca_*_1521tca   -153169SVWQQTTGSALTTALRNHHHHTBTT-HHHHHHHHaaaaaxpvxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1he1_A_1811he1   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 186
1he1_A_1811he1   A     GDPGUANOSINE-5'-DIPHOSPHATE T - 187
1he1_A_1811he1   A     GDPGUANOSINE-5'-DIPHOSPHATE G - 188
1he1_A_1811he1   A     GDPGUANOSINE-5'-DIPHOSPHATE G - 189
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1he1_A_1811he1   A AC1GDP BINDING SITE FOR CHAIN CT - 186
1he1_A_1811he1   A AC1GDP BINDING SITE FOR CHAIN CT - 187
1he1_A_1811he1   A AC1GDP BINDING SITE FOR CHAIN CG - 188

Clusters included in this Subclass
CLUSTER: HH.4.314