Information on SUBCLASS 5.3.2 |
Subclass Accession number: 4879
Subclass: 5.3.2 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 21.1 +/- 21.6 Average RMSD (Å) : 0.717 +/- 0.232 Consensus geometry
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Consensus Sequence: | XXphphpXX |
(φψ)-conformation: | aapaappaa |
Pattern: | [IL] | [adv] | [HNPQRT] | [CILM] | [ael] | [cdnv] | [DE] | [imp] | [HKNT] | [IV] | [KNS] | x | [eps] | [DEHKQ] | [IKL] | [AIV] | [dnpr] | [il] | [ILT] |
Conservation: | 1.417 | -0.613 | -0.779 | 0.254 | -0.911 | -1.424 | 2.294 | -0.655 | 0.205 | 1.800 | 0.672 | -0.873 | -0.715 | 0.141 | -0.574 | 0.435 | -0.907 | 0.105 | 0.126 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eex_A_84 | 1eex | A | 87 | 105 | LANMLCDPNVKRSEIVPLT | HHHHHH-TTS-HHHHHHHH | aaaaaaxaaxxaaaaaaaa |
1epu_A_388 | 1epu | A | 388 | 406 | IVPILLDQKISAYDKIRII | HHHHHT-TTS-HHHHHHHH | aaaaaabaaxxaaaaaaaa |
1ezf_A_64 | 1ezf | A | 79 | 97 | LDTLEDDMTISVEKKVPLL | HHHHHH-TTS-HHHHHHHH | aaaaaaxaaxxaaaaaaaa |
1hf8_A_39 | 1hf8 | A | 45 | 63 | LIQCTNEMNVNIPQLADSL | HHHHHT-TTS-HHHHHHHH | aaaaaaxaaxxaaaaaaaa |
1hx8_A_41 | 1hx8 | A | 47 | 65 | LVHCANEPNVSIPHLANLL | HHHHHH-TTS-HHHHHHHH | aaaaaaxaabxaaaaaaaa |
1iwp_A_85 | 1iwp | A | 88 | 106 | IARMLVDIHVSREEIIAIT | HHHHHH-TTS-HHHHHHHH | aaaaaaxaabxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.5.131 |
CLUSTER: HH.6.117 |