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Information on SUBCLASS 5.3.2
Subclass Accession number: 4879
Subclass: 5.3.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 21.1 +/- 21.6
Average RMSD (Å) : 0.717 +/- 0.232

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXphphpXX
(φψ)-conformation: aapaappaa
Pattern: [IL][adv][HNPQRT][CILM][ael][cdnv][DE][imp][HKNT][IV][KNS]x[eps][DEHKQ][IKL][AIV][dnpr][il][ILT]
Conservation:1.417-0.613-0.7790.254-0.911-1.4242.294-0.6550.2051.8000.672-0.873-0.7150.141-0.5740.435-0.9070.1050.126
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eex_A_841eex   A87105LANMLCDPNVKRSEIVPLTHHHHHH-TTS-HHHHHHHHaaaaaaxaaxxaaaaaaaa
1epu_A_3881epu   A388406IVPILLDQKISAYDKIRIIHHHHHT-TTS-HHHHHHHHaaaaaabaaxxaaaaaaaa
1ezf_A_641ezf   A7997LDTLEDDMTISVEKKVPLLHHHHHH-TTS-HHHHHHHHaaaaaaxaaxxaaaaaaaa
1hf8_A_391hf8   A4563LIQCTNEMNVNIPQLADSLHHHHHT-TTS-HHHHHHHHaaaaaaxaaxxaaaaaaaa
1hx8_A_411hx8   A4765LVHCANEPNVSIPHLANLLHHHHHH-TTS-HHHHHHHHaaaaaaxaabxaaaaaaaa
1iwp_A_851iwp   A88106IARMLVDIHVSREEIIAITHHHHHH-TTS-HHHHHHHHaaaaaaxaabxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1epu_A_3881epu   A     MSESELENOMETHIONINE I - 388
1epu_A_3881epu   A     MSESELENOMETHIONINE V - 389
1epu_A_3881epu   A     MSESELENOMETHIONINE P - 390
1epu_A_3881epu   A     MSESELENOMETHIONINE L - 392
1epu_A_3881epu   A     MSESELENOMETHIONINE L - 407
1epu_A_3881epu   A     MSESELENOMETHIONINE Y - 409
1epu_A_3881epu   A     MSESELENOMETHIONINE I - 411
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID V - 69
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID F - 72
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID Y - 73
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID L - 76
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID R - 77
1ezf_A_641ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID D - 80

Clusters included in this Subclass
CLUSTER: HH.5.131
CLUSTER: HH.6.117