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Information on SUBCLASS 5.12.1
Subclass Accession number: 4900
Subclass: 5.12.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 36.0 +/- 23.6
Average RMSD (Å) : 0.457 +/- 0.151

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hLGphLXXX
(φψ)-conformation: aapaabpaa
Pattern: [AP][akr][A][ILMV][AT][AKNRST][ST][LY][GKNQ][AKRT][FLV][ALTV][FL][EG][DENS][AIKV][L][GNPQS][AEPQS]x[deknqs][KQR][AEKQR]x[LY]x[DNST][W][LM][IKLV]
Conservation:0.951-0.7430.9240.1260.276-0.6530.3070.156-0.408-0.511-0.149-0.5090.2930.5150.024-0.6140.924-0.625-0.601-0.896-0.8070.358-0.346-0.9600.026-0.946-0.2804.3180.538-0.689
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bsg_*_1831bsg   -183212PRAITRTYGRLVLGDALNPRDRRLLTSWLLHHHHHHHHHHHHTSSSS-HHHHHHHHHHHHaaaaaaaaaaaaaxaabxaaaaaaaaaaaa
1bue_A_1831bue   A183212PAAVAKSLKTLALGNILSEHEKETYQTWLKHHHHHHHHHHHHHSSSS-HHHHHHHHHHHHaaaaaaaaaaaaaxaaxxaaaaaaaaaaaa
1dy6_A_1831dy6   A183212PKAVANSLNKLALGNVLNAKVKAIYQNWLKHHHHHHHHHHHHTSSSS-HHHHHHHHHHHHaaaaaaaaaaaaaxaabxaaaaaaaaaaaa
1g6a_A_1831g6a   A183212PKAIASTLNKFLFGSALSEMNQKKLESWMVHHHHHHHHHHHHHSSSS-HHHHHHHHHHHHaaaaaaaaaaaaaxaabxaaaaaaaaaaaa
1hzo_A_1831hzo   A183212PIAMAKSLQALTLGDALGQSQRQQLVTWLKHHHHHHHHHHHHTSSSS-HHHHHHHHHHHHaaaaaaaaaaaaaxaabxaaaaaaaaaaaa
1i2s_A_1831i2s   A183212ARALATSLQAFALEDKLPSEKRELLIDWMKHHHHHHHHHHHHTSTTS-HHHHHHHHHHHHaaaaaaaaaaaaaxaabxaaaaaaaaaaaa
1o7e_A_1831o7e   A183212PAAMAATLQRVVLGEVLQPASRQQLADWLIHHHHHHHHHHHHTSSSS-HHHHHHHHHHHHaaaaaaaaaaaaaxaabxaaaaaaaaaaaa
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o7e_A_1831o7e   A BC7SO4 BINDING SITE FOR CHAIN AR - 204
1o7e_A_1831o7e   A BC7SO4 BINDING SITE FOR CHAIN AQ - 205

Clusters included in this Subclass
CLUSTER: HH.5.86