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Information on SUBCLASS 5.12.2
Subclass Accession number: 4901
Subclass: 5.12.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.1 (>50 %)  3.1.4 (>50 %)  3.1.4.3
GO : GO:0005509 (>75 %)  GO:0008081 (>75 %)  GO:0008270 (>75 %)  GO:0016298 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  GO:0042578 (>75 %)  GO:0046914 (>75 %)  
SCOP : 48536 (>75 %)  48537 (>75 %)  48538 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 67.9 +/- -19.8
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: HApMSXSWD
(φψ)-conformation: aapaabpaa
Pattern: [F][N][AES][W][S][K][EG][FY][AC][KR]x[FW][A][K][KT][AG][K][DNS][IL][Y][Y][S][H][A][NST][M][S][CHN][S][W][D][DE][W][DE][Y][A][A][KS][HV][AGT][LV][AG][N][AS][Q][K][G][TV][AS][G][Y][IL][Y][R][F][L]
Conservation:0.6500.650-1.2802.769-0.1970.226-1.1570.175-0.601-0.404-1.5630.036-0.1970.226-1.034-0.8740.226-0.951-0.6091.0741.074-0.1971.498-0.197-0.9980.226-0.197-1.280-0.1972.7690.650-0.2492.769-0.2781.074-0.197-0.197-0.911-1.319-1.375-0.828-0.8630.650-0.8280.2260.2260.650-0.911-0.8160.6501.074-0.6181.0740.2260.650-0.197
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ca1_*_1851ca1   -185240FNAWSKEYARGFAKTGKSIYYSHASMSHSWDDWDYAAKVTLANSQKGTAGYIYRFLHHHHHHHHHHHHHHHHHHHHHHTTSTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaaaNaxaabxaaaaaaaaaaaaaaaaaaaaaaaaaaa
1kho_A_1851kho   A185240FNSWSKEFARSFAKTAKDLYYSHANMSCSWDEWDYAAKVALANSQKGTSGYIYRFLHHHHHHHHHHHHHHHHHHHHHHTTSTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaaaaaxaabxaaaaaaaaaaaaaaaaaaaaaaaaaaa
1olp_A_1851olp   A185240FNEWSKGYCKYWAKKAKNLYYSHATMSNSWDDWEYAASHGVGNAQKGVAGYLYRFLHHHHHHHHHHHHHHHHHHHHHHH-STTS-HHHHHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaaaaaaaxaabxaaaaaaaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ca1_*_1851ca1   *     CDCADMIUM ION H - 241
1ca1_*_1851ca1   *     CDCADMIUM ION D - 242
1ca1_*_1851ca1   *     CDCADMIUM ION E - 245
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ca1_*_1851ca1   * CD4CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.H - 207
1ca1_*_1851ca1   * CD6CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.H - 212
1ca1_*_1851ca1   * CD5CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.D - 216
1ca1_*_1851ca1   * CD8CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.H - 241
1ca1_*_1851ca1   * CD8CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.E - 245

Clusters included in this Subclass
CLUSTER: HH.6.121