Logo
Information on SUBCLASS 5.13.1
Subclass Accession number: 4902
Subclass: 5.13.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 25.8 +/- 23.7
Average RMSD (Å) : 0.770 +/- 0.353

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: hXXXXXXXX
(φψ)-conformation: aalppbbaa
Pattern: [ip][ENR][ikmtv][ailv]x[gqr]x[ekps][hlvy][ADGKNS]x[eknpr][adstv][AD][CILMV][ewy][as][ILV][GT][csv][FILV][ACFGILMT][AGMY]x[FGLMV][aflv][crst]
Conservation:0.6921.217-0.454-0.447-1.146-0.120-1.039-0.734-0.491-0.249-1.151-0.839-0.6812.2410.5811.1560.5981.4912.267-0.5970.939-0.973-0.193-0.446-0.369-0.376-0.880
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a06_*_1871a06   -187213PEVLAQKPYSKAVDCWSIGVIAYILLCHHHHTT----THHHHHHHHHHHHHHHHaaaaalbpxbaaaaaaaaaaaaaaaaN
1blx_A_1881blx   A188214PEVLLQSSYATPVDLWSVGCIFAEMFRHHHHTT----THHHHHHHHHHHHHHHHaaaaalxxbbawaaaaaaaaaaaaaaa
1cki_A_1871cki   A187213INTHLGIEQSRRDDLESLGYVLMYFNLHHHHTTB---HHHHHHHHHHHHHHHHHaaaaavbxxbaaaaaaaaaaaaaaaaa
1csn_*_1871csn   -187213INTHLGREQSRRDDLEALGHVFMYFLRHHHHTT----HHHHHHHHHHHHHHHHHaaaaavxpxbaaaaaaaaaaaaaaaaa
1jks_A_1861jks   A186212PEIVNYEPLGLEADMWSIGVITYILLSHHHHTT--B-THHHHHHHHHHHHHHHHaaaaalbwbbaaaaaaaaaaaaaaaaa
1kob_A_2191kob   A219245PEIVDREPVGFYTDMWAIGVLGYVLLSHHHHTT--B-HHHHHHHHHHHHHHHHHaaaaalbxbbaaaaaaaaaaaaaaaaN
1mq4_A_2981mq4   A298324PEMIEGRMHDEKVDLWSLGVLCYEFLVHHHHTT--B-THHHHHHHHHHHHHHHHaaaaavxxbbaaaaaaaaaaaaaaaaa
1o6y_A_1851o6y   A185211PEQARGDSVDARSDVYSLGCVLYEVLTHHHHTT----HHHHHHHHHHHHHHHHHaaaaalxxbbaaaaaaaaaaaaaaaaa
1pmq_A_2321pmq   A232258PEVILGMGYKENVDIWSVGCIMGEMVRHHHHTT----TTHHHHHHHHHHHHHHHaaaaalbxbbaaaaaaaaaaaaaaaaa
4ubp_A_54ubp   A2248RRKARGLKLNYPEAVAIITSFIMEGARHHHHTT--B-HHHHHHHHHHHHHHHHHaaaaagxxxbaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mq4_A_2981mq4   A     PO4PHOSPHATE ION M - 300
1pmq_A_2321pmq   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER E - 255

Clusters included in this Subclass
CLUSTER: HH.6.29
CLUSTER: HH.7.11