Information on SUBCLASS 5.23.1 |
Subclass Accession number: 4915
Subclass: 5.23.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 35.0 +/- 27.2 Average RMSD (Å) : 0.260 +/- 0.055 Consensus geometry
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Consensus Sequence: | XphXGhGXp |
(φψ)-conformation: | aappgbbaa |
Pattern: | x | [DKN] | x | [L] | x | [krt] | [FLV] | [PST] | [G] | [IV] | [G] | [PRT] | [KSW] | [ATV] | [A] | [DNR] | x | [FILV] | [ACV] | x |
Conservation: | -0.890 | -0.073 | -1.020 | 1.115 | -0.739 | -0.895 | -0.180 | 0.031 | 2.213 | 0.842 | 2.213 | -0.524 | -0.579 | -0.209 | 1.115 | -0.023 | -0.994 | -0.136 | -0.228 | -1.040 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bpy_A_92 | 1bpy | A | 97 | 116 | INFLTRVSGIGPSAARKFVD | HHHHTTSTT--HHHHHHHHH | aaaaaaxpgbbaaaaaaaaa |
1jn3_A_92 | 1jn3 | A | 97 | 116 | INFLTRVTGIGPSAARKLVD | HHHHTTSTT--HHHHHHHHH | aaaaaaxpgbxaaaaaaaaa |
1m3q_A_233 | 1m3q | A | 237 | 256 | HKALCILPGVGTKVADCICL | HHHHTTSTT--HHHHHHHHH | aaaaaaxxvbbaaaaaaaaa |
1mpg_A_202 | 1mpg | A | 206 | 225 | MKTLQTFPGIGRWTANYFAL | HHHHTTSTT--HHHHHHHHH | aaaaaaxxvbxaaaaaaaaa |
1orn_A_109 | 1orn | A | 109 | 128 | RDELMKLPGVGRKTANVVVS | HHHHTTSTT--HHHHHHHHH | aaaaaaxxvbbaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m3q_A_233 | 1m3q | A | DRZ3',4'-DIHYDROXY-PENTANAL-5'-PHOSPHATE | K - 249 |
1m3q_A_233 | 1m3q | A | ANG8-AMINOGUANINE | K - 249 |
1m3q_A_233 | 1m3q | A | ANG8-AMINOGUANINE | C - 253 |
1m3q_A_233 | 1m3q | A | ANG8-AMINOGUANINE | L - 256 |
1m3q_A_233 | 1m3q | A | ANG8-AMINOGUANINE | M - 257 |
1orn_A_109 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | K - 121 |
1orn_A_109 | 1orn | A | PEDPENTANE-3,4-DIOL-5-PHOSPHATE | T - 122 |
Clusters included in this Subclass |
CLUSTER: HH.6.64 |
CLUSTER: HH.8.16 |