Information on SUBCLASS 6.7.1 |
Subclass Accession number: 4947
Subclass: 6.7.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 17.2 +/- 22.6 Average RMSD (Å) : 1.255 +/- 0.234 Consensus geometry
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Consensus Sequence: | ppcXXhXphp |
(φψ)-conformation: | aalbbpppaa |
Pattern: | [aekr] | [EFKLM] | [ael] | [adkqrs] | [eknrs] | [efhkmry] | [DGKR] | x | x | [ILPVY] | x | [DKQST] | [FPVWY] | [dehnps] | x | [agnt] |
Conservation: | -0.250 | -0.067 | -0.181 | -0.743 | 0.606 | -0.937 | 1.762 | -0.951 | -1.602 | 0.676 | -1.055 | 2.047 | 0.273 | -0.151 | -0.214 | 0.788 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cjc_A_407 | 1cjc | A | 412 | 427 | ALLDSRGVWPVSFSDW | HHHHHHT---B-HHHH | aaaaaavxbxxxaaaa |
1ds6_A_123 | 1ds6 | A | 127 | 142 | EKLKEKKLAPITYPQG | HHHHHTT-----HHHH | aaaaaavbbxxxaaaa |
1kbz_A_269 | 1kbz | A | 270 | 285 | KFQRNFDLILPQWELG | HHHHHHT----BHHHH | aaaaaalbxbxpaaaa |
1kmq_A_125 | 1kmq | A | 129 | 144 | RELAKMKQEPVKPEEG | HHHHHTT-----HHHH | aaaaaalbbppxaaaa |
1m7b_A_143 | 1m7b | A | 147 | 162 | VELSNHRQTPVSYDQG | HHHHTTT-----HHHH | aaaaaalbbxxxaaaa |
1mpp_*_130 | 1mpp | - | 130 | 145 | AMEAEYGDTYNTVHVN | HHHHHHS-----HHHH | aaaaaavbbbxxaaaa |
1qgo_A_45 | 1qgo | A | 50 | 65 | KLRQRDGIDIDTPLQA | HHHHHH------HHHH | aaaaaavxbbxxaaaa |
1ryh_A_142 | 1ryh | A | 146 | 161 | EKLKEKKLTPITYPQG | HHHHTTT-----HHHH | aaaaaalbbxxxaaaa |
1uuq_A_140 | 1uuq | A | 144 | 159 | YMAWIEGEPVQDPNVT | HHHHHHT-----HHHH | aaaaaavbxxxxaaaa |
2asi_*_142 | 2asi | - | 142 | 157 | AMEAEYGSTYNTVHVN | HHHHHHS-----HHHH | aaaaaavbbbxxaaaa |
2ngr_A_123 | 2ngr | A | 127 | 142 | EKLAKNKQKPITPETA | HHHHTTT-----HHHH | aaaaaNlbbxxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kbz_A_269 | 1kbz | A | MGMAGNESIUM ION | R - 288 |
1kbz_A_269 | 1kbz | A | MGMAGNESIUM ION | E - 292 |
1kmq_A_125 | 1kmq | A | DOXDIOXANE | R - 145 |
1kmq_A_125 | 1kmq | A | DOXDIOXANE | A - 148 |
1kmq_A_125 | 1kmq | A | DOXDIOXANE | N - 149 |
1uuq_A_140 | 1uuq | A | GOLGLYCEROL | M - 145 |
1uuq_A_140 | 1uuq | A | GOLGLYCEROL | I - 148 |
2asi_*_142 | 2asi | * | NAGN-ACETYL-D-GLUCOSAMINE | E - 146 |
Clusters included in this Subclass |
CLUSTER: HH.5.123 |
CLUSTER: HH.6.45 |
CLUSTER: HH.7.46 |
CLUSTER: HH.7.76 |
CLUSTER: HH.8.61 |
CLUSTER: HH.9.93 |