Logo
Information on SUBCLASS 6.7.1
Subclass Accession number: 4947
Subclass: 6.7.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 17.2 +/- 22.6
Average RMSD (Å) : 1.255 +/- 0.234

Consensus geometry
d (Å): 19 delta (°): 90-135 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: ppcXXhXphp
(φψ)-conformation: aalbbpppaa
Pattern: [aekr][EFKLM][ael][adkqrs][eknrs][efhkmry][DGKR]xx[ILPVY]x[DKQST][FPVWY][dehnps]x[agnt]
Conservation:-0.250-0.067-0.181-0.7430.606-0.9371.762-0.951-1.6020.676-1.0552.0470.273-0.151-0.2140.788
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cjc_A_4071cjc   A412427ALLDSRGVWPVSFSDWHHHHHHT---B-HHHHaaaaaavxbxxxaaaa
1ds6_A_1231ds6   A127142EKLKEKKLAPITYPQGHHHHHTT-----HHHHaaaaaavbbxxxaaaa
1kbz_A_2691kbz   A270285KFQRNFDLILPQWELGHHHHHHT----BHHHHaaaaaalbxbxpaaaa
1kmq_A_1251kmq   A129144RELAKMKQEPVKPEEGHHHHHTT-----HHHHaaaaaalbbppxaaaa
1m7b_A_1431m7b   A147162VELSNHRQTPVSYDQGHHHHTTT-----HHHHaaaaaalbbxxxaaaa
1mpp_*_1301mpp   -130145AMEAEYGDTYNTVHVNHHHHHHS-----HHHHaaaaaavbbbxxaaaa
1qgo_A_451qgo   A5065KLRQRDGIDIDTPLQAHHHHHH------HHHHaaaaaavxbbxxaaaa
1ryh_A_1421ryh   A146161EKLKEKKLTPITYPQGHHHHTTT-----HHHHaaaaaalbbxxxaaaa
1uuq_A_1401uuq   A144159YMAWIEGEPVQDPNVTHHHHHHT-----HHHHaaaaaavbxxxxaaaa
2asi_*_1422asi   -142157AMEAEYGSTYNTVHVNHHHHHHS-----HHHHaaaaaavbbbxxaaaa
2ngr_A_1232ngr   A127142EKLAKNKQKPITPETAHHHHTTT-----HHHHaaaaaNlbbxxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kbz_A_2691kbz   A     MGMAGNESIUM ION R - 288
1kbz_A_2691kbz   A     MGMAGNESIUM ION E - 292
1kmq_A_1251kmq   A     DOXDIOXANE R - 145
1kmq_A_1251kmq   A     DOXDIOXANE A - 148
1kmq_A_1251kmq   A     DOXDIOXANE N - 149
1uuq_A_1401uuq   A     GOLGLYCEROL M - 145
1uuq_A_1401uuq   A     GOLGLYCEROL I - 148
2asi_*_1422asi   *     NAGN-ACETYL-D-GLUCOSAMINE E - 146

Clusters included in this Subclass
CLUSTER: HH.5.123
CLUSTER: HH.6.45
CLUSTER: HH.7.46
CLUSTER: HH.7.76
CLUSTER: HH.8.61
CLUSTER: HH.9.93