Information on SUBCLASS 2.2.25 |
Subclass Accession number: 495
Subclass: 2.2.25 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 12.2 +/- 17.4 Average RMSD (Å) : 0.340 +/- 0.055 Consensus geometry
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Consensus Sequence: | XXhpcX |
(φψ)-conformation: | bpaaba |
Pattern: | x | x | [ADPV] | [ekn] | x | [DEP] | [DEK] | x | [CEKN] |
Conservation: | -0.977 | -0.969 | -0.743 | -0.102 | 0.297 | 1.405 | 1.793 | -0.445 | -0.260 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b8a_A_342 | 1b8a | A | 342 | 350 | KYDNKPEIC | EETTEEEEE | xxaabaabb |
1bt3_A_97 | 1bt3 | A | 97 | 105 | DQVNFPDQE | EETTEEEEE | bxaabaabx |
1cip_A_233 | 1cip | A | 233 | 241 | VLAEDEEMN | EETTEEEEE | bxaabaabx |
1r89_A_215 | 1r89 | A | 217 | 225 | VDPVDEKRN | EETTEEEEE | xxaabaaxx |
1tfe_*_160 | 1tfe | - | 160 | 168 | PFVKDDKVK | EETTEEEEE | xpaabaabx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1r89_A_215 | 1r89 | A | CTPCYTIDINE-5'-TRIPHOSPHATE | R - 224 |
Clusters included in this Subclass |
CLUSTER: HA.1.41 |