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Information on SUBCLASS 2.2.25
Subclass Accession number: 495
Subclass: 2.2.25 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 12.2 +/- 17.4
Average RMSD (Å) : 0.340 +/- 0.055

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXhpcX
(φψ)-conformation: bpaaba
Pattern: xx[ADPV][ekn]x[DEP][DEK]x[CEKN]
Conservation:-0.977-0.969-0.743-0.1020.2971.4051.793-0.445-0.260
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b8a_A_3421b8a   A342350KYDNKPEICEETTEEEEExxaabaabb
1bt3_A_971bt3   A97105DQVNFPDQEEETTEEEEEbxaabaabx
1cip_A_2331cip   A233241VLAEDEEMNEETTEEEEEbxaabaabx
1r89_A_2151r89   A217225VDPVDEKRNEETTEEEEExxaabaaxx
1tfe_*_1601tfe   -160168PFVKDDKVKEETTEEEEExpaabaabx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1r89_A_2151r89   A     CTPCYTIDINE-5'-TRIPHOSPHATE R - 224

Clusters included in this Subclass
CLUSTER: HA.1.41