ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.38.1

Subclass Accession number: 4981
Subclass: 6.38.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.2 (>75 %)  3.2.2 (>75 %)  3.2.2.22
GO : GO:0016798 (>75 %)  GO:0016799 (>75 %)  GO:0030597 (>75 %)
SCOP : 56370 (>75 %)  56371 (>75 %)  56372 (>75 %)

Number of loops: 3

Average sequence ID (%) : 84.6 +/- -57.4
Average RMSD (Å) : 0.167 +/- 0.058

Consensus geometry

d (Å): 15

delta (°): 90-135

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	FNRXFpPNXK
(φψ)-conformation:	aabpbbppaa

Pattern:	[K]	[Y]	[I]	[E]	[N]	[Q]	[V]	[K]	[T]	[N]	[F]	[N]	[R]	[AD]	[F]	[NSY]	[P]	[N]	[ADP]	[K]	[V]	[L]	[DN]	[L]	[EQ]	[E]
Conservation:	0.226	1.486	-0.405	0.226	0.856	0.226	-0.405	0.226	0.226	0.856	0.856	0.856	0.226	-2.008	0.856	-2.155	1.486	0.856	-2.295	0.226	-0.405	-0.405	-0.715	-0.405	-0.715	0.226

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1apa_*_185	1apa	-	185	210	KYIENQVKTNFNRAFYPNAKVLNLEE	HHHHHHHHHTTTS-B---HHHHHHHH	aaaaaaaaaaaabxbbxxaaaaaaaa
1d6a_A_181	1d6a	A	181	206	KYIENQVKTNFNRAFNPNPKVLNLQE	HHHHHHHHHTTTS-B---HHHHHHHH	aaaaaaaaaaaabxbbpxaaaaaaaa
1j1q_A_180	1j1q	A	180	205	KYIENQVKTNFNRDFSPNDKVLDLEE	HHHHHHHHHTTTS-B---HHHHHHHH	aaaaaaaaaaaabxbxpxaaaaaaaa

Clusters included in this Subclass