Information on SUBCLASS 6.42.1 |
Subclass Accession number: 4985
Subclass: 6.42.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.3 (>50 %) 2.3.1 (>50 %) 2.3.1.41 GO : GO:0008415 (>75 %) GO:0016746 (>75 %) GO:0016747 (>75 %) SCOP : 53900 (>75 %) 53901 (>75 %) 53902 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 39.5 +/- 13.9 Average RMSD (Å) : 0.300 +/- 0.100 Consensus geometry
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Consensus Sequence: | pXGPpphSPF |
(φψ)-conformation: | aaeaaappaa |
Pattern: | [LM] | [EGK] | [LTV] | [ILW] | [E] | [ADE] | [NQ] | [HQS] | [RT] | x | [FL] | [LM] | [DEN] | [GKR] | [G] | [P] | [NRS] | [KR] | [CI] | [S] | [P] | [F] | [FM] | [IV] | [P] | x | [MT] |
Conservation: | 0.006 | -1.089 | -0.914 | -0.914 | 0.947 | -0.914 | -0.222 | -0.798 | -0.527 | -1.089 | -0.411 | 0.005 | -0.333 | -0.972 | 1.470 | 1.994 | -0.798 | 0.197 | -0.438 | 0.423 | 1.994 | 1.470 | -0.067 | 0.173 | 1.994 | -0.634 | -0.553 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e5m_A_115 | 1e5m | A | 115 | 141 | LKVLEDQQTILLDKGPSRCSPFMIPMM | HHHHHHHHHHHHHH-GGGS-TTHHHHH | aaaaaaaaaaaaaaeaaaxxaaaaaaa |
1j3n_A_109 | 1j3n | A | 109 | 135 | METWEAQSRVFLERGPNRISPFFIPMM | HHHHHHHHHHHHHH-GGGS-TTHHHHH | aaaaaaaaaaaaaaeaaaxxaaaaaaa |
1kas_*_111 | 1kas | - | 111 | 137 | LGLIEENHTSLMNGGPRKISPFFVPST | HHHHHHHHHHHHHH-GGGS-TTHHHHH | aaaaaaaaaaaaaaeaaaxpaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j3n_A_109 | 1j3n | A | CITCITRIC ACID | Q - 115 |
1j3n_A_109 | 1j3n | A | CITCITRIC ACID | V - 118 |
1j3n_A_109 | 1j3n | A | CITCITRIC ACID | R - 122 |
1j3n_A_109 | 1j3n | A | CITCITRIC ACID | N - 125 |
1j3n_A_109 | 1j3n | A | CITCITRIC ACID | R - 126 |
1j3n_A_109 | 1j3n | A | CITCITRIC ACID | I - 127 |
1j3n_A_109 | 1j3n | A | CITCITRIC ACID | S - 128 |
1j3n_A_109 | 1j3n | A | CITCITRIC ACID | P - 129 |
Clusters included in this Subclass |
CLUSTER: HH.7.193 |