ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.45.1

Subclass Accession number: 4988
Subclass: 6.45.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.2 (>50 %)  3.2.2 (>50 %)  3.2.2.22
GO : GO:0016798 (>50 %)  GO:0016799 (>50 %)  GO:0030597 (>50 %)
SCOP : 56370 (>50 %)  56371 (>50 %)  56372 (>50 %)

Number of loops: 3

Average sequence ID (%) : 27.8 +/- 34.8
Average RMSD (Å) : 1.367 +/- 0.551

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	XXXccXXXhX
(φψ)-conformation:	aaplbppbaa

Pattern:	[IL]	x	x	[LV]	x	[ET]	[FMV]	[ILM]	[DEN]	[AGN]	[KV]	[AN]	[GK]	[GK]	x	x	[TV]	[AV]	[KV]	[DN]	[AE]	[A]	[DR]	[FI]	[CL]	x	[IL]	[AI]	[GI]	[KQ]
Conservation:	1.183	-1.518	-1.517	0.666	-1.284	0.163	-0.233	0.701	0.701	-0.584	-0.685	-0.227	-0.152	-0.152	-1.401	-0.557	0.351	0.148	-0.557	1.978	-0.040	2.219	-0.152	0.808	0.645	-0.999	1.183	-0.370	-1.517	1.199

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1l1l_A_275	1l1l	A	281	310	LLDVNEVLNNKAGGRLTAVDAADICNLIGK	HHHHHHHHHTTTTS---HHHHHHHHHHHHH	aaaaaaaaaaapvbbxbaaaaaaaaaaaaa
1lp8_A_144	1lp8	A	144	173	INLLITMIDGVNKKVRVVKDEARFLLIAIQ	HHHHHHHHHTTTTS---HHHHHHHHHHHHH	aaaaaaaaaaaxlbxxbaaaaaaaaaaaaa
1qi7_A_143	1qi7	A	143	172	IDLLLTFMEAVNKKARVVKNEARFLLIAIQ	HHHHHHHHHTTTTS---HHHHHHHHHHHHH	aaaaaaaaaaaxlbxxbaaaaaaaaaaaaa

Clusters included in this Subclass