Information on SUBCLASS 7.13.1 |
Subclass Accession number: 5016
Subclass: 7.13.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.14 (>50 %) 1.14 (>75 %) 1.14.99 (>50 %) 1.14.99 (>75 %) 1.14.99.11.14.99.1 GO : GO:0004601 (>75 %) GO:0004666 (>75 %) GO:0016684 (>75 %) GO:0016701 (>75 %) GO:0016702 (>75 %) GO:0016705 (>75 %) GO:0051213 (>75 %) SCOP : 48112 (>75 %) 48112 (>75 %) 48113 (>75 %) 48113 (>75 %) 48132 (>75 %) 48132 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 33.3 +/- 27.7 Average RMSD (Å) : 0.875 +/- 0.236 Consensus geometry
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Consensus Sequence: | phGhXhhppXp |
(φψ)-conformation: | aalbbppabaa |
Pattern: | [AFLM] | [NSV] | [EN] | [RTY] | x | [IK] | [NRT] | [FL] | [GS] | [GLM] | [AK] | [LP] | [FPY] | [ST] | [ST] | x | [EKNQ] | [E] | [FL] | [EST] |
Conservation: | -0.861 | -1.006 | 0.844 | -0.953 | -1.149 | -0.580 | -0.336 | 0.966 | 1.233 | -1.229 | 0.203 | 0.297 | -0.393 | 0.685 | 0.720 | -1.125 | -0.103 | 2.658 | 0.432 | -0.301 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cvu_A_463 | 1cvu | A | 463 | 482 | LNEYRKRFSLKPYTSFEELT | HHHHHHHTT----SSHHHHH | aaaaaaaavbxxxabaaaaa |
1f00_I_853 | 1f00 | I | 856 | 875 | AVNTCKNFGGKLPSSQNELE | HHHHHHHTT-B--SSHHHHH | aaaaaaaavbbxpabaaaaa |
1q4g_A_463 | 1q4g | A | 463 | 482 | FNEYRKRFGMKPYTSFQELT | HHHHHHHTT----SSHHHHH | aaaaaaaavbxxxabaaaaa |
1umn_A_55 | 1umn | A | 76 | 95 | MSERLITLGGAPFSTLKEFS | HHHHHHHTT-----SHHHHH | aaaaaaaavxbwpabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1q4g_A_463 | 1q4g | A | BOGB-OCTYLGLUCOSIDE | F - 470 |
1q4g_A_463 | 1q4g | A | BOGB-OCTYLGLUCOSIDE | G - 471 |
1q4g_A_463 | 1q4g | A | BOGB-OCTYLGLUCOSIDE | M - 472 |
1umn_A_55 | 1umn | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | F - 55 |
1umn_A_55 | 1umn | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | M - 56 |
1umn_A_55 | 1umn | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | I - 57 |
1umn_A_55 | 1umn | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | W - 58 |
1umn_A_55 | 1umn | A | CACALCIUM ION | D - 63 |
1umn_A_55 | 1umn | A | CACALCIUM ION | M - 66 |
1umn_A_55 | 1umn | A | CACALCIUM ION | E - 67 |
1umn_A_55 | 1umn | A | CACALCIUM ION | D - 70 |
1umn_A_55 | 1umn | A | CACALCIUM ION | D - 74 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1umn_A_55 | 1umn | A | C01CA BINDING SITE FOR CHAIN A | D - 63 |
Clusters included in this Subclass |
CLUSTER: HH.7.96 |