Information on SUBCLASS 7.20.1 |
Subclass Accession number: 5023
Subclass: 7.20.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : - (>50 %) GO : GO:0005506 (>75 %) GO:0016151 (>50 %) GO:0016903 (>50 %) GO:0018492 (>50 %) GO:0046914 (>75 %) SCOP : 56820 (>75 %) 56821 (>75 %) 64514 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 20.5 +/- 19.1 Average RMSD (Å) : 0.400 +/- 0.173 Consensus geometry
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Consensus Sequence: | XXXXchcXDXX |
(φψ)-conformation: | aapplFpabaa |
Pattern: | [I] | [DH] | x | x | [IV] | [AST] | [EG] | x | [LMV] | x | [AQR] | [AT] | x | [MT] | [GN] | [ACM] | [DN] | x | [D] | [ADP] | x | x | [L] | [ALV] | [EFL] | [GRS] | [AGV] | x | [MR] | [CTV] | [ACS] | [AL] | [A] | [DK] | x | [AET] | [GL] | x | x |
Conservation: | 1.670 | 0.947 | -0.491 | -1.183 | 1.305 | 0.027 | 0.005 | -0.924 | 0.373 | -0.232 | -0.405 | 0.593 | -1.096 | 0.260 | 1.038 | -0.232 | 1.403 | -1.269 | 3.226 | -0.664 | -1.010 | -0.274 | 1.670 | -0.405 | -1.183 | -0.664 | -0.751 | -0.837 | 0.260 | -0.232 | 0.027 | -0.153 | 1.670 | 0.565 | -0.924 | -0.578 | -0.638 | -0.751 | -0.146 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gnl_A_60 | 1gnl | A | 62 | 100 | IDRLVTGNLFATITNANFDDDILAERVRMTCAAKKELAA | HHHHHHHHHHHTSTTTB--HHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaxpvabaxaaaaaaaaaaaaaaaaaaaa |
1oao_A_208 | 1oao | A | 208 | 246 | IHASISELVNQAHMGMDNDPVNLVFSAIRVALADYTGEH | HHHHHHHHHHHTSTTS---HHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaappvFxabaaaaaaaaaaaaaaaaaaaa |
1su8_A_186 | 1su8 | A | 186 | 224 | IDHEIAEIMHRTSMGCDADAQNLLLGGLRCSLADLAGCY | HHHHHHHHHHHTSTTS---HHHHHHHHHHHHHHHHHHHH | aaaaaaaaaaaaxpvFxabaaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gnl_A_60 | 1gnl | A | FS4IRON/SULFUR CLUSTER | I - 74 |
1gnl_A_60 | 1gnl | A | FSOIRON/SULFUR/OXYGEN HYBRID CLUSTER | I - 74 |
1gnl_A_60 | 1gnl | A | FS4IRON/SULFUR CLUSTER | T - 75 |
1gnl_A_60 | 1gnl | A | FSOIRON/SULFUR/OXYGEN HYBRID CLUSTER | T - 75 |
1gnl_A_60 | 1gnl | A | FS4IRON/SULFUR CLUSTER | N - 76 |
1gnl_A_60 | 1gnl | A | FSOIRON/SULFUR/OXYGEN HYBRID CLUSTER | N - 76 |
1oao_A_208 | 1oao | A | SF4IRON/SULFUR CLUSTER | A - 219 |
1oao_A_208 | 1oao | A | SF4IRON/SULFUR CLUSTER | H - 220 |
1oao_A_208 | 1oao | A | XCCFE(4)-NI(1)-S(4) CLUSTER | H - 220 |
1oao_A_208 | 1oao | A | FE2FE (II) ION | H - 220 |
1oao_A_208 | 1oao | A | SF4IRON/SULFUR CLUSTER | M - 221 |
1oao_A_208 | 1oao | A | XCCFE(4)-NI(1)-S(4) CLUSTER | M - 221 |
1oao_A_208 | 1oao | A | FE2FE (II) ION | M - 221 |
1oao_A_208 | 1oao | A | SF4IRON/SULFUR CLUSTER | G - 222 |
1su8_A_186 | 1su8 | A | FS4IRON/SULFUR CLUSTER | S - 198 |
1su8_A_186 | 1su8 | A | FS4IRON/SULFUR CLUSTER | M - 199 |
1su8_A_186 | 1su8 | A | FS4IRON/SULFUR CLUSTER | G - 200 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oao_A_208 | 1oao | A | AC1SF4 BINDING SITE FOR CHAIN A | M - 221 |
Clusters included in this Subclass |
CLUSTER: HH.7.36 |