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Information on SUBCLASS 8.2.1
Subclass Accession number: 5030
Subclass: 8.2.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 16

Average sequence ID (%) : 25.4 +/- 20.2
Average RMSD (Å) : 0.863 +/- 0.352

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXXPhXRhhphp
(φψ)-conformation: aapaalbppbaa
Pattern: [dehksy]xx[adeknr][adegknqt][ACFILMV][agiklv][adegknqs]xx[APT][afilm][GKQR][kry][afilmtv][AGSV][ekqrty][aipv][aekq][DEHN][ILV][AGSTV][AEGNRS][aclmv][AIV][acil][AFWY]
Conservation:-0.294-1.375-1.208-0.706-0.788-0.053-1.212-0.736-1.157-0.8132.0860.0980.1040.814-0.2740.952-0.7270.062-0.0071.5421.6610.113-0.489-0.3491.067-0.3432.029
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ae1_A_2201ae1   A221247EEIDNFIVKTPMGRAGKPQEVSALIAFHHHHHHHHHSTT-S-B-HHHHHHHHHHaaaaaaaaaxaavbxxbaaaaaaaaaa
1cyd_A_1941cyd   A195221EFARKLKERHPLRKFAEVEDVVNSILFHHHHHHHHHSTTSS-B-HHHHHHHHHHaaaaaaaaaxaalbxxxaaaaaaaaaa
1edo_A_2101edo   A211237DMEKKILGTIPLGRTGQPENVAGLVEFHHHHHHHTS-TT-S-B-HHHHHHHHHHaaaaaaaaaxaalbxxbaaaaaaaaaa
1g0o_A_2321g0o   A235261VDEYAAVQWSPLRRVGLPIDIARVVCFHHHHHHHHS-TT-S-B-HHHHHHHHHHaaaaaaaaabaalbxxbaaaaaaaaaa
1gee_A_2031gee   A204230EQRADVESMIPMGYIGEPEEIAAVAAWHHHHHHHTT-TTSS-B-HHHHHHHHHHaaaaaaaaabaavbxxbaaaaaaaaaa
1geg_A_2071geg   A207233YGTAEFAKRITLGRLSEPEDVAACVSYHHHHHHHTT-TT-S-B-HHHHHHHHHHaaaaaaaaaxaavbxxbaaaaaaaaaa
1iy8_A_2151iy8   A217243KAAEEFIQVNPSKRYGEAPEIAAVVAFHHHHHHHTT-TT-S-B-HHHHHHHHHHaaaaaaaaaxaavbxxbaaaaaaaaaa
1ja9_A_2331ja9   A235261KIDEGLANMNPLKRIGYPADIGRAVSAHHHHHHHHTSTTSS-B-HHHHHHHHHHaaaaaaaaabaalbxxbaaaaaaaaaa
1k2w_A_2071k2w   A207233EKKRQVGAAVPFGRMGRAEDLTGMAIFHHHHHHHHHSTTSS-B-HHHHHHHHHHaaaaaaaaaxaagbxxbaaaaaaaaaa
1o5i_A_1851o5i   A186212EKKKQVESQIPMRRMAKPEEIASVVAFHHHHHHHTTSTTSS-B-HHHHHHHHHHaaaaaaaaaxaavbxxxaaaaaaaaaa
1pr9_A_1941pr9   A195221HKAKTMLNRIPLGKFAEVEHVVNAILFHHHHHHHTT-TT-S-B-HHHHHHHHHHaaaaaaaaabaalbxxxaaaaaaaaaa
1px0_A_1961px0   A197223EHVAHVKKVTALQRLGTQKELGELVAFHHHHHHHHHSSSSS-B-HHHHHHHHHHaaaaaaaaabaalbxxbaaaaaaaaaa
1q7c_A_1941q7c   A195221DQRAGILAQVPAGRLGGAQEIANAVAFHHHHHHHTT-TTSS-B-HHHHHHHHHHaaaaaaaaaxaavbxxbaaaaaaaaaa
1qsg_A_2031qsg   A205231KMLAHCEAVTPIRRTVTIEDVGNSAAFHHHHHHHHHSTTSS---HHHHHHHHHHaaaaaaaaaxaalbxxbaaaaaaaaaa
1spx_A_2141spx   A215241STMATMKECVPAGVMGQPQDIAEVIAFHHHHHHHHH-TTSS-B-HHHHHHHHHHaaaaaaaaabaavbxxbaaaaaaaaaa
2ae1_*_2042ae1   -208234ENLNKLIDRCALRRMGEPKELAAMVAFHHHHHHHHTSSS-S-B-HHHHHHHHHHaaaaaaaaaxaalbxxbaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g0o_A_2321g0o   A     PYQPYROQUILON W - 243
1iy8_A_2151iy8   A     MPD2-METHYL-2,4-PENTANEDIOL F - 222
1iy8_A_2151iy8   A     MPD2-METHYL-2,4-PENTANEDIOL Y - 231
1ja9_A_2331ja9   A     PYQPYROQUILON L - 240
1pr9_A_1941pr9   A     2HPDIHYDROGENPHOSPHATE ION M - 200
1qsg_A_2031qsg   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE F - 203
1qsg_A_2031qsg   A     TCLTRICLOSAN F - 203
1qsg_A_2031qsg   A     TCLTRICLOSAN M - 206

Clusters included in this Subclass
CLUSTER: HH.7.168
CLUSTER: HH.7.84
CLUSTER: HH.9.2