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Information on SUBCLASS 8.4.1
Subclass Accession number: 5032
Subclass: 8.4.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 35.9 +/- 25.5
Average RMSD (Å) : 0.390 +/- 0.120

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 270-315
Consensus Sequence: hXpPppcpFpFX
(φψ)-conformation: aababplbpbaa
Pattern: [FIMPW][ades]x[ILMTV][EQ][PS][ENQRST][EPQR][GN][knqrs][FL][DENST][FW][AEGQST][aegknqs][agl][D][eqry][AFILV][AILVY][ADKNS][fhwy][AL][aekqt]
Conservation:-0.453-0.679-0.902-0.3221.0241.670-0.515-0.1830.905-0.7981.335-0.2201.700-0.711-1.186-0.4852.556-0.672-0.293-0.301-0.678-0.0400.349-1.100
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bg4_*_521bg4   -5275WDATEPNRGQFTFSGSDYLVNFAQHHHH-SBTTB---HHHHHHHHHHHaaaababpvbbbaaaaaaaaaaaa
1fh9_A_481fh9   A4871WDATEPSQNSFSFGAGDRVASYAAHHHH-SBTTB---HHHHHHHHHHHaaaababpvbxbaaaaaaaaaaaa
1hiz_A_641hiz   A6487PISIQPEEGKFNFEQADRIVKFAKHHHH-SBTTB---HHHHHHHHHHHaaaababpvbxbaaaaaaaaaaaa
1i1w_A_511i1w   A5174WDATEPSQGNFNFAGADYLVNWAQHHHH-SBTTB---HHHHHHHHHHHaaaababpvbxbaaaaaaaaaaaa
1kwg_A_381kwg   A3861WALLEPEPGRLEWGWLDEAIATLAHHHH-SBTTB---HHHHHHHHHHHaaaababpvbxbaaaaaaaaaaaa
1n82_A_491n82   A4972FEHLQPEEGKFTFQEADRIVDFACHHHH-SBTTB---HHHHHHHHHHHaaaababxvbbbaaaaaaaaaaaa
1nq6_A_481nq6   A4871WDAVESSRNSFSFSAADRIVSHAQHHHH-SBTTB---HHHHHHHHHHHaaaababpvbbbaaaaaaaaaaaa
1od8_A_491od8   A4972IDATEPQRGQFNFSSADRVYNWAVHHHH-SBTTB---HHHHHHHHHHHaaaababpvbxbaaaaaaaaaaaa
1us3_A_3001us3   A300323MSYMQPTEGNFNFTNADAFVDWATHHHH-SBTTB---HHHHHHHHHHHaaaababxvbxbaaaaaaaaaaaa
1xyz_A_5641xyz   A564587FDALQPRQNVFDFSKGDQLLAFAEHHHH-SBTTB---HHHHHHHHHHHaaaababxvbbbaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bg4_*_521bg4   *     GOLGLYCEROL D - 53
1bg4_*_521bg4   *     GOLGLYCEROL A - 54
1bg4_*_521bg4   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL S - 65
1bg4_*_521bg4   *     GOLGLYCEROL G - 66
1bg4_*_521bg4   *     GOLGLYCEROL S - 67
1bg4_*_521bg4   *     GOLGLYCEROL D - 68
1bg4_*_521bg4   *     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL Y - 69
1bg4_*_521bg4   *     GOLGLYCEROL V - 71
1bg4_*_521bg4   *     GOLGLYCEROL N - 72
1bg4_*_521bg4   *     GOLGLYCEROL Q - 75
1i1w_A_511i1w   A     GOLGLYCEROL F - 63
1i1w_A_511i1w   A     ACNACETONE F - 63
1i1w_A_511i1w   A     GOLGLYCEROL A - 66
1i1w_A_511i1w   A     GOLGLYCEROL D - 67
1i1w_A_511i1w   A     ACNACETONE D - 67
1i1w_A_511i1w   A     GOLGLYCEROL V - 70
1i1w_A_511i1w   A     GOLGLYCEROL N - 71
1n82_A_491n82   A     GOLGLYCEROL Q - 62
1n82_A_491n82   A     GOLGLYCEROL D - 65
1n82_A_491n82   A     GOLGLYCEROL R - 66
1n82_A_491n82   A     GOLGLYCEROL D - 69

Clusters included in this Subclass
CLUSTER: HH.8.5