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Information on SUBCLASS 8.10.1
Subclass Accession number: 5039
Subclass: 8.10.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 45.8 +/- 29.0
Average RMSD (Å) : 0.680 +/- 0.277

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXXpGXhphphp
(φψ)-conformation: aalagbbbbpaa
Pattern: [F][D][DN][FY][I][AQS][CG][CL][IV][kr][L][DQR][AR][LM][FT][DR][as][F][KR][RS]x[D][KST][ADN][GQ][DQT][G]x[IV][NQ][FV][NPS][IY][DEQ][DEQ][FWY][IL][QS][CLM][TV]
Conservation:1.9991.9990.4721.1850.718-0.9170.1940.3710.427-1.2390.718-0.859-0.6590.206-0.681-0.544-1.2611.9990.539-0.573-1.4331.999-0.784-0.956-0.681-0.9961.999-1.4100.415-0.062-0.608-0.894-0.101-0.142-0.1280.7120.112-0.175-0.558-0.405
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dvi_A_2281dvi   A228267FDNFISCLVRLDAMFRAFRSLDKNGTGQIQVNIQEWLQLTHHHHHHHHHHHHHHHHHHHHH-TT-SS-----HHHHHHHHaaaaaaaaaaaaaaaaaaaaaaaalavbbbbxaaaaaaaa
1gjy_A_1561gjy   A156195FDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQCVHHHHHHHHHHHHHHHHHHHHH-TT--S-----HHHHHHHHaaaaaaaaaaaaaaaaaaaaabaalagbbxxbaaaaaaaa
1hqv_A_1481hqv   A148187FDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVHHHHHHHHHHHHHHHHHHHHH-TT-SS-----HHHHHHHHaaaaaaaaaaaaaaaaaaaaaxaalavbbbbxaaaaaaaa
1juo_A_1561juo   A156195FDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVHHHHHHHHHHHHHHHHHHHHT-TT--S-----HHHHHHHHaaaaaaaaaaaaaaaaaaaaaaaalavbbxxxaaaaaaaa
1kfu_S_9261kfu   S926965FDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLTHHHHHHHHHHHHHHHHHHHHH-SS--S-----HHHHHHHHaaaaaaaaaaaaaaaaaaaaaaaagaUbbbbxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dvi_A_2281dvi   A     CACALCIUM ION F - 228
1dvi_A_2281dvi   A     CACALCIUM ION D - 229
1dvi_A_2281dvi   A     CACALCIUM ION N - 230
1hqv_A_1481hqv   A     CACALCIUM ION Y - 168
1hqv_A_1481hqv   A     CACALCIUM ION D - 169
1hqv_A_1481hqv   A     CACALCIUM ION T - 170
1hqv_A_1481hqv   A     CACALCIUM ION D - 171
1hqv_A_1481hqv   A     CACALCIUM ION Q - 172
1hqv_A_1481hqv   A     CACALCIUM ION D - 173
1hqv_A_1481hqv   A     CACALCIUM ION G - 174
1hqv_A_1481hqv   A     CACALCIUM ION W - 175
1hqv_A_1481hqv   A     CACALCIUM ION I - 176
1hqv_A_1481hqv   A     CACALCIUM ION Q - 177
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gjy_A_1561gjy   A AC1SO4 BINDING SITE FOR CHAIN A THE SULFATE BINDING SITE IS THE IN VIVO C-AMP DEPENDENT PKA PHOSPHORYLATION SITE.S - 172
1gjy_A_1561gjy   A AC1SO4 BINDING SITE FOR CHAIN A THE SULFATE BINDING SITE IS THE IN VIVO C-AMP DEPENDENT PKA PHOSPHORYLATION SITE.R - 175
1gjy_A_1561gjy   A AC1SO4 BINDING SITE FOR CHAIN A THE SULFATE BINDING SITE IS THE IN VIVO C-AMP DEPENDENT PKA PHOSPHORYLATION SITE.R - 176

Clusters included in this Subclass
CLUSTER: HH.11.18