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Information on SUBCLASS 8.17.1
Subclass Accession number: 5046
Subclass: 8.17.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.1 (>75 %)  1.1.1 (>75 %)  1.1.1.21 (>75 %)  
GO : GO:0004032 (>75 %)  GO:0005489 (>75 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)  
SCOP : 51350 (>75 %)  51430 (>75 %)  51431 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 60.4 +/- 15.0
Average RMSD (Å) : 0.275 +/- 0.096

Consensus geometry
d (Å): 21 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: NhpVFDFphSXp
(φψ)-conformation: aapaaabbppaa
Pattern: [P][AES][R][I]x[EQ][N][FI][KQ][V][F][D][F][EQT][FL][S][DPS][EQ][DE][M][AKT][QT][IL]x
Conservation:1.864-1.0410.8010.270-1.7570.0381.332-0.543-0.2440.2701.3321.3321.332-0.947-0.5810.270-1.0690.0050.1250.801-1.267-0.726-0.253-1.344
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c9w_A_2661c9w   A266289PARIHENFQVFDFQLSDQEMATILHHHHHHHT--SS----HHHHHHHHaaaaaaaaxaaabbxxaaaaaaaa
1frb_*_2661frb   -266289PSRIQENIQVFDFQLSDEEMATILHHHHHHHH--SS----HHHHHHHHaaaaaaaaxaaabbxxaaaaaaaa
1us0_A_2661us0   A266289PERIAENFKVFDFELSSQDMTTLLHHHHHHHH--SS----HHHHHHHHaaaaaaaaxaaabbxxaaaaaaaa
2alr_*_2662alr   -266289PSRILQNIKVFDFTFSPEEMKQLNHHHHHHHH--SS----HHHHHHHHaaaaaaaaxaaabbxxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c9w_A_2661c9w   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 268
1c9w_A_2661c9w   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 269
1c9w_A_2661c9w   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 271
1c9w_A_2661c9w   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 272
1us0_A_2661us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 268
1us0_A_2661us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 269
1us0_A_2661us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 271
1us0_A_2661us0   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 272

Clusters included in this Subclass
CLUSTER: HH.8.39