ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.26.1

Subclass Accession number: 5055
Subclass: 8.26.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>50 %)  1 (>50 %)  2 (>50 %)  7 (>50 %)
GO : GO:0004672 (>75 %)  GO:0005524 (>50 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  GO:0030554 (>50 %)
SCOP : 56111 (>50 %)  56112 (>50 %)  88854 (>50 %)

Number of loops: 3

Average sequence ID (%) : 23.1 +/- 22.6
Average RMSD (Å) : 1.033 +/- 0.404

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 225-270

Consensus Sequence:	XpLXXDXphXpp
(φψ)-conformation:	aappaappppaa

Pattern:	[IY]	[LM]	[DHN]	[FLY]	[ACL]	[AR]	[DNS]	[L]	x	[EF]	[D]	[ADV]	[DKT]	[PV]	[DP]	[EY]	[DS]	[LY]	[LV]	[EQR]	[AGQ]	[AL]	[FK]	x	x	x
Conservation:	0.527	0.907	0.299	0.212	-0.487	-0.057	0.124	1.523	-0.924	-0.394	3.096	-1.274	-0.750	0.153	0.595	0.273	0.791	0.527	0.400	0.212	-0.837	-0.349	-0.394	-1.536	-1.187	-1.449

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1cki_A_251	1cki	A	256	281	YLNFCRSLRFDDKPDYSYLRQLFRNL	HHHHHHHS-TT----HHHHHHHHHHH	aaaaaaaxxaaxxxxaaaaaaaaaaa
1csn_*_251	1csn	-	256	281	YMHYARNLAFDATPDYDYLQGLFSKV	HHHHHHH--TT----HHHHHHHHHHH	aaaaaaaxxaaxxxxaaaaaaaaaaa
1ufb_A_58	1ufb	A	58	83	ILDLLADLPEDVDVPEDLVEAAKVLD	HHHHHHTS-TTS---HHHHHHHHHHH	aaaaaaaxwaaxxbxaaaaaaaaaaa

Clusters included in this Subclass