ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.33.1

Subclass Accession number: 5062
Subclass: 8.33.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.14 (>75 %)  1.14.14 (>75 %)  1.14.14.1
GO : GO:0004497 (>75 %)  GO:0016705 (>75 %)  GO:0016712 (>75 %)  GO:0050381 (>75 %)
SCOP : 48263 (>75 %)  48264 (>75 %)  48265 (>75 %)

Number of loops: 2

Average sequence ID (%) : 39.5 +/- 0.0
Average RMSD (Å) : 0.500 +/- 0.000

Consensus geometry

d (Å): 17

delta (°): 90-135

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	hFXcRFDYKDXX
(φψ)-conformation:	aalbpppaapaa

Pattern:	[T]	[FL]	[IL]	[FL]	x	[CS]	[AI]	[PT]	[CS]	[N]	[IV]	[I]	[C]	[S]	[IV]	[IV]	[F]	x	[KN]	[R]	[F]	[D]	[Y]	[K]	[D]	[EP]	x	[F]	[L]	[KR]	[L]	[LM]	[DE]	x	[FL]	[FH]	[EQ]	[NS]
Conservation:	0.677	-0.785	-0.492	-0.785	-0.785	-0.639	-1.370	-0.785	-0.639	1.262	-0.200	0.092	3.017	0.092	-0.200	-0.200	1.262	-0.785	-0.639	0.677	1.262	1.262	1.847	0.677	1.262	-0.785	-1.516	1.262	0.092	-0.200	0.092	-0.346	-0.054	-1.662	-0.785	-0.492	-0.200	-0.492

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1nr6_A_167	1nr6	A	167	204	TFILGCAPCNVICSVIFHNRFDYKDEEFLKLMESLHEN	HHHHHHHHHHHHHHHHHS----TT-HHHHHHHHHHHHH	aaaaaaaaaaaaaaaaavbbbxaaxaaaaaaaaaaaaa
1po5_A_168	1po5	A	168	205	TLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQS	HHHHHHHHHHHHHHHHHSS---TT-HHHHHHHHHHHHH	aaaaaaaaaaaaaaaaavbxxpaaxaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1nr6_A_167	1nr6	A	HEMPROTOPORPHYRIN IX CONTAINING FE	I - 178
1nr6_A_167	1nr6	A	DIF2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID	L - 201
1nr6_A_167	1nr6	A	DIF2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID	N - 204
1nr6_A_167	1nr6	A	DIF2-[2,6-DICHLOROPHENYL)AMINO]BENZENEACETIC ACID	V - 205
1po5_A_168	1po5	A	HEMPROTOPORPHYRIN IX CONTAINING FE	I - 179

Clusters included in this Subclass