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Information on SUBCLASS 9.5.1
Subclass Accession number: 5072
Subclass: 9.5.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 24.1 +/- 26.2
Average RMSD (Å) : 1.925 +/- 0.171

Consensus geometry
d (Å): 21 delta (°): 90-135 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: LNGpXhXpXhXph
(φψ)-conformation: aalbbaaaappaa
Pattern: [CGI][FIT][EQ][HIV][ER]x[DR][HM][L][DN][DG][EGKT]x[FW]x[DHS]x[LMV][PST][EKQT]xxx[DEK]x[IV][DKR][EKP][IK]
Conservation:-1.079-0.5401.360-0.4040.606-1.0270.0600.4751.7361.6971.076-0.957-1.2872.218-1.193-0.003-0.8000.548-0.029-0.249-0.816-1.103-0.7820.565-0.7821.415-0.0220.011-0.696
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f9a_A_1261f9a   A126154GTEIRRRMLNGEKWEHLVPKAVVDVIKEIHHHHHHHHHHT---GGGS-HHHHHHHHHHaaaaaaaaaavxxaaaabxaaaaaaaaaa
1hyb_A_1321hyb   A132160GTEVRRRMLDDGDWRSLLPESVVEVIDEIHHHHHHHHHHT---GGGS-HHHHHHHHHHaaaaaaaaaavxxaaaabxaaaaaaaaaa
1ix1_A_1261ix1   A131159CIQHECDHLNGKLFVDYLSTLKRDRIRKKHHHHHHHHHTT--GGGGS-HHHHHHHHHHaaaaaaaaaavbbaaaaxxaaaaaaaaaa
1rl4_A_1901rl4   A195223IFQHEFDHLNGTLFIDKMTQVDKKKVRPKHHHHHHHHHTT--GGGGB-HHHHHHHHHHaaaaaaaaaavbbaaaaxpaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f9a_A_1261f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE G - 126
1f9a_A_1261f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE T - 127
1f9a_A_1261f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE E - 128
1f9a_A_1261f9a   A     ATPADENOSINE-5'-TRIPHOSPHATE R - 130
1ix1_A_1261ix1   A     BB2ACTINONIN L - 127
1ix1_A_1261ix1   A     MHA(CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID L - 128
1ix1_A_1261ix1   A     BB2ACTINONIN V - 130
1ix1_A_1261ix1   A     BB2ACTINONIN C - 131
1ix1_A_1261ix1   A     ZNZINC ION H - 134
1ix1_A_1261ix1   A     BB2ACTINONIN H - 134
1ix1_A_1261ix1   A     ZNZINC ION E - 135
1ix1_A_1261ix1   A     BB2ACTINONIN E - 135
1ix1_A_1261ix1   A     ZNZINC ION H - 138
1ix1_A_1261ix1   A     BB2ACTINONIN H - 138
1ix1_A_1261ix1   A     ZNZINC ION L - 143
1ix1_A_1261ix1   A     ZNZINC ION F - 144
1rl4_A_1901rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE G - 190
1rl4_A_1901rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE I - 191
1rl4_A_1901rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID R - 194
1rl4_A_1901rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE R - 194
1rl4_A_1901rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID I - 195
1rl4_A_1901rl4   A     BL52-{N'-[2-(5-AMINO-1-PHENYLCARBAMOYL-PENTYLCARBAMOYL)-HEXYL]-HYDRAZINOMETHYL}-HEXANOIC ACID(5-AMINO-1-PHENYLCARBAMOYL-PENTYL)-AMIDE I - 195
1rl4_A_1901rl4   A     COCOBALT (II) ION H - 198
1rl4_A_1901rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID H - 198
1rl4_A_1901rl4   A     COCOBALT (II) ION E - 199
1rl4_A_1901rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID E - 199
1rl4_A_1901rl4   A     COCOBALT (II) ION H - 202
1rl4_A_1901rl4   A     BRR(2R)-2-{[FORMYL(HYDROXY)AMINO]METHYL}HEXANOIC ACID H - 202
1rl4_A_1901rl4   A     COCOBALT (II) ION F - 208

Clusters included in this Subclass
CLUSTER: HH.9.29