Information on SUBCLASS 2.2.38 |
Subclass Accession number: 508
Subclass: 2.2.38 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1.1 GO : GO:0004175 (>50 %) GO:0004252 (>50 %) GO:0004553 (>75 %) GO:0005509 (>75 %) GO:0008233 (>50 %) GO:0008236 (>50 %) GO:0016160 (>75 %) GO:0016798 (>75 %) SCOP : 50493 (>50 %) 50494 (>50 %) 50514 (>50 %) 51350 (>75 %) 51445 (>75 %) 51446 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 18.8 +/- 24.3 Average RMSD (Å) : 0.433 +/- 0.153 Consensus geometry
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Consensus Sequence: | hpXpXh |
(φψ)-conformation: | abaabb |
Pattern: | x | x | [DQW] | [CI] | [GT] | [GV] | [ASV] | x | [LV] | [HNS] | [AEP] | [DNQ] | [TW] | [FV] | x | [LT] |
Conservation: | -0.674 | -1.816 | -0.817 | 2.262 | 0.396 | -0.405 | -0.817 | -0.570 | 1.157 | 0.610 | -0.817 | 0.467 | 1.032 | 0.231 | -0.570 | 0.330 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gdn_A_39 | 1gdn | A | 39 | 54 | GPWCGGSLLNANTVLT | EEEEEEEEEETTEEEE | bxIaebbxabaabbxb |
1gvz_A_39 | 1gvz | A | 39 | 54 | HFQCGGVLVHPQWVLT | EEEEEEEEEETTEEEE | bxabxebxabaabbxb |
1pj5_A_549 | 1pj5 | A | 550 | 565 | RSDITVARLSEDTFQL | EEEEEEEEEETTEEEE | abbbbbbxabaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gvz_A_39 | 1gvz | A | ACTACETATE ION | V - 47 |
1gvz_A_39 | 1gvz | A | ACTACETATE ION | H - 48 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gvz_A_39 | 1gvz | A | AC4ACT BINDING SITE FOR CHAIN A | H - 48 |
Clusters included in this Subclass |
CLUSTER: HA.2.62 |