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Information on SUBCLASS 2.2.38
Subclass Accession number: 508
Subclass: 2.2.38 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.1
GO : GO:0004175 (>50 %)  GO:0004252 (>50 %)  GO:0004553 (>75 %)  GO:0005509 (>75 %)  GO:0008233 (>50 %)  GO:0008236 (>50 %)  GO:0016160 (>75 %)  GO:0016798 (>75 %)  
SCOP : 50493 (>50 %)  50494 (>50 %)  50514 (>50 %)  51350 (>75 %)  51445 (>75 %)  51446 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 18.8 +/- 24.3
Average RMSD (Å) : 0.433 +/- 0.153

Consensus geometry
d (Å): 3 delta (°): 135-180 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hpXpXh
(φψ)-conformation: abaabb
Pattern: xx[DQW][CI][GT][GV][ASV]x[LV][HNS][AEP][DNQ][TW][FV]x[LT]
Conservation:-0.674-1.816-0.8172.2620.396-0.405-0.817-0.5701.1570.610-0.8170.4671.0320.231-0.5700.330
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gdn_A_391gdn   A3954GPWCGGSLLNANTVLTEEEEEEEEEETTEEEEbxIaebbxabaabbxb
1gvz_A_391gvz   A3954HFQCGGVLVHPQWVLTEEEEEEEEEETTEEEEbxabxebxabaabbxb
1pj5_A_5491pj5   A550565RSDITVARLSEDTFQLEEEEEEEEEETTEEEEabbbbbbxabaabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gvz_A_391gvz   A     ACTACETATE ION V - 47
1gvz_A_391gvz   A     ACTACETATE ION H - 48
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gvz_A_391gvz   A AC4ACT BINDING SITE FOR CHAIN AH - 48

Clusters included in this Subclass
CLUSTER: HA.2.62