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Information on SUBCLASS 10.4.1
Subclass Accession number: 5101
Subclass: 10.4.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.14 (>75 %)  1.14.13 (>75 %)  1.14.13.39 (>75 %)  
GO : GO:0000287 (>75 %)  GO:0004497 (>75 %)  GO:0004517 (>75 %)  GO:0005489 (>75 %)  GO:0005489 (>75 %)  GO:0005515 (>75 %)  GO:0005516 (>75 %)  GO:0010181 (>75 %)  GO:0016168 (>75 %)  GO:0016705 (>75 %)  GO:0016709 (>75 %)  GO:0042314 (>75 %)  GO:0045156 (>75 %)  GO:0046906 (>75 %)  GO:0048037 (>75 %)  GO:0050662 (>75 %)  
SCOP : 56511 (>75 %)  56512 (>75 %)  56513 (>75 %)  81482 (>75 %)  81483 (>75 %)  81484 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 61.4 +/- 19.2
Average RMSD (Å) : 0.260 +/- 0.089

Consensus geometry
d (Å): 23 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: hMGXWhpAhPYGIh
(φψ)-conformation: aalbaaappppbaa
Pattern: [FIV][R][P][ILV][LM][LM][G][AS][W][AGS][EHKY][AG][FV][P][FY][G][I][FLW][PST][H][L][D][W][TV][ANS][AN][FTV][GS]
Conservation:-0.7620.3251.052-0.535-0.313-0.2070.688-0.5772.506-0.803-0.975-0.611-0.7431.0520.3300.688-0.039-0.765-0.9281.415-0.0390.6882.506-0.682-0.883-0.754-1.074-0.561
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dxr_L_1341dxr   L134161FRPLLLGSWGHAFPYGILSHLDWVNNFGHHHHHHT-GGGS--B-TTHHHHHHHHHHaaaaaavbaaaxxxxbaaaaaaaaaaaa
1eys_L_1421eys   L142169VRPLLMGAWGHGFPYGILSHLDWVSNVGHHHHHHT-GGGS--BSTTHHHHHHHHHHaaaaaavbaaaxxxbbaaaaaaaaaaaa
1eys_M_1621eys   M162189IRPVMMGSWAKAVPFGIFPHLDWTAAFSHHHHHHT-GGGS--B-TTHHHHHHHHHHaaaaaavbaaaxxxxbaaaaaaaaaaaa
1l9b_M_1631l9b   M163190IRPILMGSWSEAVPYGIFSHLDWTNNFSHHHHHHT-GGGS--BSTTHHHHHHHHHHaaaaaavbaaaxxxxbaaaaaaaaaaaa
1rzh_L_1341rzh   L134161FRPVMMGAWGYAFPYGIWTHLDWVSNTGHHHHHHT-GGGS--B-TTHHHHHHHHHHaaaaaavbaaaxxxxbaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B F - 146
1dxr_L_1341dxr   L     BPBBACTERIOPHEOPHYTIN B F - 146
1dxr_L_1341dxr   L     BPBBACTERIOPHEOPHYTIN B P - 147
1dxr_L_1341dxr   L     BPBBACTERIOPHEOPHYTIN B Y - 148
1dxr_L_1341dxr   L     BPBBACTERIOPHEOPHYTIN B G - 149
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B I - 150
1dxr_L_1341dxr   L     BPBBACTERIOPHEOPHYTIN B I - 150
1dxr_L_1341dxr   L     LDALAURYL DIMETHYLAMINE-N-OXIDE I - 150
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B L - 151
1dxr_L_1341dxr   L     BPBBACTERIOPHEOPHYTIN B L - 151
1dxr_L_1341dxr   L     LDALAURYL DIMETHYLAMINE-N-OXIDE L - 151
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B H - 153
1dxr_L_1341dxr   L     BPBBACTERIOPHEOPHYTIN B H - 153
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B L - 154
1dxr_L_1341dxr   L     LDALAURYL DIMETHYLAMINE-N-OXIDE L - 154
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B W - 156
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B V - 157
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B N - 158
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B N - 159
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B F - 160
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B G - 161
1dxr_L_1341dxr   L     HECHEME C Y - 162
1dxr_L_1341dxr   L     BCBBACTERIOCHLOROPHYLL B Y - 162
1eys_L_1421eys   L     LDALAURYL DIMETHYLAMINE-N-OXIDE W - 150
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A F - 154
1eys_L_1421eys   L     BPHBACTERIOPHEOPHYTIN A F - 154
1eys_L_1421eys   L     BPHBACTERIOPHEOPHYTIN A P - 155
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A Y - 156
1eys_L_1421eys   L     BPHBACTERIOPHEOPHYTIN A Y - 156
1eys_L_1421eys   L     BPHBACTERIOPHEOPHYTIN A G - 157
1eys_L_1421eys   L     BGLB-2-OCTYLGLUCOSIDE I - 158
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A I - 158
1eys_L_1421eys   L     BPHBACTERIOPHEOPHYTIN A I - 158
1eys_L_1421eys   L     PEFDI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE I - 158
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A L - 159
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A H - 161
1eys_L_1421eys   L     BPHBACTERIOPHEOPHYTIN A H - 161
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A L - 162
1eys_M_1621eys   M     BGLB-2-OCTYLGLUCOSIDE I - 162
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A W - 164
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A V - 165
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A S - 166
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A N - 167
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A V - 168
1eys_L_1421eys   L     BCLBACTERIOCHLOROPHYLL A G - 169
1eys_M_1621eys   M     CRTSPIRILLOXANTHIN W - 170
1eys_M_1621eys   M     CRTSPIRILLOXANTHIN A - 173
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A V - 174
1eys_M_1621eys   M     CRTSPIRILLOXANTHIN V - 174
1eys_M_1621eys   M     CRTSPIRILLOXANTHIN P - 175
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A F - 176
1eys_M_1621eys   M     CRTSPIRILLOXANTHIN F - 176
1eys_M_1621eys   M     CRTSPIRILLOXANTHIN G - 177
1eys_M_1621eys   M     BGLB-2-OCTYLGLUCOSIDE I - 178
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A I - 178
1eys_M_1621eys   M     CRTSPIRILLOXANTHIN I - 178
1eys_M_1621eys   M     BGLB-2-OCTYLGLUCOSIDE F - 179
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A F - 179
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A H - 181
1eys_M_1621eys   M     CRTSPIRILLOXANTHIN H - 181
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A L - 182
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A W - 184
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A T - 185
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A A - 186
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A F - 188
1eys_M_1621eys   M     BCLBACTERIOCHLOROPHYLL A S - 189
1eys_M_1621eys   M     HEMPROTOPORPHYRIN IX CONTAINING FE I - 190
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A V - 175
1l9b_M_1631l9b   M     LDALAURYL DIMETHYLAMINE-N-OXIDE V - 175
1l9b_M_1631l9b   M     LDALAURYL DIMETHYLAMINE-N-OXIDE P - 176
1l9b_M_1631l9b   M     LDALAURYL DIMETHYLAMINE-N-OXIDE Y - 177
1l9b_M_1631l9b   M     LDALAURYL DIMETHYLAMINE-N-OXIDE G - 178
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A I - 179
1l9b_M_1631l9b   M     LDALAURYL DIMETHYLAMINE-N-OXIDE I - 179
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A F - 180
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A H - 182
1l9b_M_1631l9b   M     LDALAURYL DIMETHYLAMINE-N-OXIDE H - 182
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A L - 183
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A W - 185
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A T - 186
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A N - 187
1l9b_M_1631l9b   M     HEMPROTOPORPHYRIN IX CONTAINING FE N - 187
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A N - 188
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A F - 189
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A S - 190
1l9b_M_1631l9b   M     BCLBACTERIOCHLOROPHYLL A L - 191
1l9b_M_1631l9b   M     HEMPROTOPORPHYRIN IX CONTAINING FE L - 191
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A F - 146
1rzh_L_1341rzh   L     BPHBACTERIOPHEOPHYTIN A F - 146
1rzh_L_1341rzh   L     BPHBACTERIOPHEOPHYTIN A P - 147
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A Y - 148
1rzh_L_1341rzh   L     BPHBACTERIOPHEOPHYTIN A Y - 148
1rzh_L_1341rzh   L     BPHBACTERIOPHEOPHYTIN A G - 149
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A I - 150
1rzh_L_1341rzh   L     BPHBACTERIOPHEOPHYTIN A I - 150
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A W - 151
1rzh_L_1341rzh   L     BPHBACTERIOPHEOPHYTIN A W - 151
1rzh_L_1341rzh   L     LDALAURYL DIMETHYLAMINE-N-OXIDE W - 151
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A H - 153
1rzh_L_1341rzh   L     BPHBACTERIOPHEOPHYTIN A H - 153
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A L - 154
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A W - 156
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A V - 157
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A S - 158
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A N - 159
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A T - 160
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A G - 161
1rzh_L_1341rzh   L     BCLBACTERIOCHLOROPHYLL A Y - 162

Clusters included in this Subclass
CLUSTER: HH.11.19