Information on SUBCLASS 10.11.1 |
Subclass Accession number: 5108
Subclass: 10.11.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.15 (>75 %) 1.15.1 (>75 %) 1.15.1.1 (>75 %) 2.7.2 (>50 %) 2.7.2.3 GO : GO:0004618 (>50 %) GO:0004784 (>75 %) GO:0016301 (>50 %) GO:0016721 (>75 %) GO:0016774 (>50 %) SCOP : 46556 (>75 %) 46609 (>75 %) 46610 (>75 %) 53747 (>75 %) 53748 (>75 %) 53749 (>75 %) 54718 (>75 %) 54719 (>75 %) 54720 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 59.6 +/- 15.7 Average RMSD (Å) : 0.550 +/- 0.129 Consensus geometry
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Consensus Sequence: | pXhpPcXGGXPpGc |
(φψ)-conformation: | aabbplbeebpbea |
Pattern: | [GV] | [G] | [IV] | [F] | [N] | [N] | [A] | [AG] | [Q] | [TV] | [LW] | [N] | [H] | [NT] | [FL] | [FY] | [FW] | [NT] | [CQS] | [FL] | [AKRS] | [P] | [GN] | [AGK] | [G] | [G] | x | [P] | [KT] | [G] | [ADK] | [LV] | [AG] | [ADE] | [AR] | [I] | [ADN] | [AKS] | [AQS] | [F] |
Conservation: | -1.015 | 1.110 | -0.054 | 1.110 | 1.110 | 1.110 | 0.163 | -0.594 | 0.637 | -0.670 | -0.012 | 1.110 | 2.057 | -0.424 | -0.407 | 0.632 | 0.822 | -0.331 | -1.157 | -0.594 | -1.198 | 1.584 | -0.282 | -1.251 | 1.110 | 1.110 | -1.435 | 1.584 | -0.728 | 1.110 | -1.292 | -0.545 | -0.594 | -0.944 | -0.878 | 0.163 | -1.139 | -1.048 | -1.045 | 1.110 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dt0_A_61 | 1dt0 | A | 61 | 100 | GGIFNNAAQVWNHTFYWNCLSPNAGGQPTGALADAINAAF | HHHHHHHHHHHHHHHHHHTB-SS--S---HHHHHHHHHHH | eaaaaaaaaaaaaaaaaaabbxlbeebxbeaaaaaaaaaa |
1isa_A_61 | 1isa | A | 61 | 100 | GGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASF | HHHHHHHHHHHHHHHHHHTB-TT--S---HHHHHHHHHHH | eaaaaaaaaaaaaaaaaaabbxlbeexxbeaaaaaaaaaa |
1my6_A_67 | 1my6 | A | 67 | 106 | VGIFNNAAQVWNHTFFWNSLKPGGGGVPTGDVAARINSAF | HHHHHHHHHHHHHHHHHHTB-TT--S---HHHHHHHHHHH | aaaaaaaaaaaaaaaaaaabbxvxeebxbeaaaaaaaaaa |
1qnn_A_62 | 1qnn | A | 62 | 101 | GGIFNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQF | HHHHHHHHHHHHHHHHHHTB-TT--S---HHHHHHHHHHH | eaaaaaaaaaaaaaaaaaabbxlFeebxbeaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dt0_A_61 | 1dt0 | A | FEFE (III) ION | Q - 69 |
1dt0_A_61 | 1dt0 | A | FEFE (III) ION | H - 73 |
1dt0_A_61 | 1dt0 | A | FEFE (III) ION | Y - 76 |
1isa_A_61 | 1isa | A | FE2FE (II) ION | Q - 69 |
1isa_A_61 | 1isa | A | FE2FE (II) ION | H - 73 |
1isa_A_61 | 1isa | A | FE2FE (II) ION | Y - 76 |
1my6_A_67 | 1my6 | A | FEFE (III) ION | Q - 75 |
1my6_A_67 | 1my6 | A | FEFE (III) ION | H - 79 |
1my6_A_67 | 1my6 | A | FEFE (III) ION | F - 82 |
1qnn_A_62 | 1qnn | A | FEFE (III) ION | Q - 70 |
1qnn_A_62 | 1qnn | A | FEFE (III) ION | H - 74 |
1qnn_A_62 | 1qnn | A | FEFE (III) ION | Y - 77 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1qnn_A_62 | 1qnn | A | FE1METAL BINDING SITE OF CHAIN A | H - 74 |
Clusters included in this Subclass |
CLUSTER: HH.10.35 |