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Information on SUBCLASS 2.2.41
Subclass Accession number: 511
Subclass: 2.2.41 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1 (>75 %)  3 (>75 %)  5 (>75 %)  
GO : GO:0003677 (>75 %)  GO:0004407 (>50 %)  GO:0004553 (>50 %)  GO:0008270 (>50 %)  GO:0008810 (>50 %)  GO:0016798 (>50 %)  GO:0016810 (>50 %)  GO:0016811 (>50 %)  GO:0017136 (>50 %)  GO:0019213 (>50 %)  GO:0046914 (>50 %)  
SCOP : 50684 (>50 %)  50685 (>50 %)  50686 (>50 %)  52466 (>75 %)  52467 (>75 %)  63984 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 38.9 +/- 19.3
Average RMSD (Å) : 0.367 +/- 0.115

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hphHGp
(φψ)-conformation: bpaaeb
Pattern: [IV][EH][ALM][H][G][EST][FL]x[KTV][SV][HR][C]
Conservation:0.0280.039-0.7071.6260.914-0.668-0.365-0.984-0.905-0.842-0.1181.982
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1j8f_A_1831j8f   A184195VEAHGTFYTSHCEETTEEEEEEEEbxaaebaabbbx
1m2k_A_1121m2k   A113124IHLHGSLRVVRCEETTEEEEEEEEbxaaebaabbbx
1s5p_A_1441s5p   A144155IHMHGELLKVRCEETTEEEEEEEExxaaebaabbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j8f_A_1831j8f   A     ZNZINC ION C - 195
1m2k_A_1121m2k   A     APRADENOSINE-5-DIPHOSPHORIBOSE H - 116
1m2k_A_1121m2k   A     ZNZINC ION C - 124
1s5p_A_1441s5p   A     ALYN(6)-ACETYLLYSINE H - 147
1s5p_A_1441s5p   A     ZNZINC ION C - 155

Clusters included in this Subclass
CLUSTER: HA.1.84