Information on SUBCLASS 14.2.1 |
Subclass Accession number: 5154
Subclass: 14.2.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 53.6 +/- 22.2 Average RMSD (Å) : 0.340 +/- 0.089 Consensus geometry
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Consensus Sequence: | FhpXpXNpRpDphGGphp |
(φψ)-conformation: | aapaaapapapaablbaa |
Pattern: | [L] | [IL] | [DN] | [EQ] | [F] | [LM] | [DKT] | [dp] | [hqrt] | [stv] | [N] | [DQT] | [R] | [ST] | [D] | [EKQ] | [WY] | [G] | [G] | [DS] | [ILY] | [AEQR] | [N] | [R] | [ACM] | [KR] | [F] | [ALPT] | [KLV] | [EQ] | [IV] | [V] | [DER] | [AG] | [LV] | [av] | [EKNS] | [AER] | [IV] |
Conservation: | 0.463 | -0.006 | 0.196 | 0.272 | 1.532 | 0.036 | -1.042 | -1.498 | -1.525 | -1.154 | 1.532 | -0.847 | 0.997 | -0.187 | 1.532 | -0.251 | 1.113 | 1.532 | 1.532 | -0.377 | -0.758 | -0.981 | 1.532 | 0.997 | -0.574 | 0.308 | 1.532 | -1.431 | -1.171 | 0.298 | 0.210 | 0.463 | -0.599 | -0.359 | -0.240 | -1.349 | -0.845 | -1.103 | 0.221 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1icp_A_193 | 1icp | A | 193 | 231 | LIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEI | HHHHHH-TTT----STTSSSHHHHHHHHHHHHHHHHHHH | aaaaaaxaaaxaxabaabvbaaaaaaaaaaaaaaaaaaa |
1oyb_*_197 | 1oyb | - | 197 | 235 | LLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAI | HHHHHH-TTT----STTSSSHHHHHHHHHHHHHHHHHHH | aaaaaaxaaabaxaxaabvbaaaaaaaaaaaaaaaaaaa |
1ps9_A_167 | 1ps9 | A | 167 | 205 | LINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERV | HHHHHH-TTT----STTSSSHHHHHHHHHHHHHHHHHHH | aaaaaaxaaabaxaxaabexaaaaaaaaaaaaaaaaaaa |
1q45_A_192 | 1q45 | A | 192 | 230 | LIDQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAI | HHHHHH-TTT----STTSSSHHHHHHHHHHHHHHHHHHH | aaaaaaxaaaxaxaxaabexaaaaaaaaaaaaaaaaaaa |
1vji_A_189 | 1vji | A | 189 | 227 | LIDQFMKDTVNDRTDEYGGSLQNRCKFPLEIVDAVAKEI | HHHHHH-TTT----STTSSSHHHHHHHHHHHHHHHHHHH | aaaaaaxaaaxaxabaabvbaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ps9_A_167 | 1ps9 | A | MDE5-MERCAPTOETHANOL-2-DECENOYL-COENZYME A | R - 175 |
Clusters included in this Subclass |
CLUSTER: HH.13.8 |