Logo
Information on SUBCLASS 14.3.1
Subclass Accession number: 5155
Subclass: 14.3.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 58.6 +/- 16.1
Average RMSD (Å) : 0.250 +/- 0.100

Consensus geometry
d (Å): 27 delta (°): 90-135 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: hWhGYPFXppYNpXRGHX
(φψ)-conformation: aaplbaaaabbbppbpaa
Pattern: [L][KV]x[AL][W]x[G][Y][AP][F]x[KRY][DE][Y][N][AEKS][PT][R][G][H]x[FY][A][ILV][DQT][D]xx[EN]
Conservation:0.090-0.924-1.020-0.8292.709-1.0250.8381.212-0.2840.838-0.746-0.8540.0651.2120.838-0.986-0.3330.4640.8381.586-1.0630.4610.090-0.421-0.9040.838-1.326-1.103-0.263
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fs7_A_821fs7   A83111LVVAWAGYPFSKDYNAPRGHYYALQDNINHHHHTTTSGGGT--B----GGGHHHHHHHaaaaapvbaaaabbbxxbpaaaaaaaaaa
1gu6_A_741gu6   A75103LVILWAGYPFSRDYNKPRGHAFAVTDVREHHHHTTTSGGGT--B----GGGHHHHHHHaaaaapvbaaaabbbxpbpaaaaaaaaaa
1oah_A_991oah   A99127LKNLWLGYPFMYEYNETRGHTYAIDDFLNHHHHTTTSGGGT--B----GGGHHHHHHHaaaaapvbaaaabbbxxbxaaaaaaaaaa
1qdb_A_811qdb   A82110LVIAWSGYAFSKDYNSPRGHYYALQDNVNHHHHTTTSGGGT--B----GGGHHHHHHHaaaaaxvbaaaabbbxxbpaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 92
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 95
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 96
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 97
1fs7_A_821fs7   A     CACALCIUM ION N - 97
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 98
1fs7_A_821fs7   A     CACALCIUM ION A - 98
1fs7_A_821fs7   A     Y1YTTRIUM ION A - 98
1fs7_A_821fs7   A     ACTACETATE ION A - 98
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 99
1fs7_A_821fs7   A     CACALCIUM ION P - 99
1fs7_A_821fs7   A     Y1YTTRIUM ION P - 99
1fs7_A_821fs7   A     ACTACETATE ION P - 99
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 100
1fs7_A_821fs7   A     CACALCIUM ION R - 100
1fs7_A_821fs7   A     Y1YTTRIUM ION R - 100
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 101
1fs7_A_821fs7   A     CACALCIUM ION G - 101
1fs7_A_821fs7   A     Y1YTTRIUM ION G - 101
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 102
1fs7_A_821fs7   A     CACALCIUM ION H - 102
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 103
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 104
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 105
1fs7_A_821fs7   A     CACALCIUM ION A - 105
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 106
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 108
1fs7_A_821fs7   A     CACALCIUM ION D - 108
1fs7_A_821fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 109
1fs7_A_821fs7   A     CACALCIUM ION N - 109
1gu6_A_741gu6   A     HECHEME C F - 84
1gu6_A_741gu6   A     HECHEME C D - 87
1gu6_A_741gu6   A     HECHEME C Y - 88
1gu6_A_741gu6   A     CACALCIUM ION N - 89
1gu6_A_741gu6   A     HECHEME C N - 89
1gu6_A_741gu6   A     CACALCIUM ION K - 90
1gu6_A_741gu6   A     HECHEME C K - 90
1gu6_A_741gu6   A     CACALCIUM ION P - 91
1gu6_A_741gu6   A     HECHEME C P - 91
1gu6_A_741gu6   A     CACALCIUM ION R - 92
1gu6_A_741gu6   A     HECHEME C R - 92
1gu6_A_741gu6   A     CACALCIUM ION G - 93
1gu6_A_741gu6   A     HECHEME C G - 93
1gu6_A_741gu6   A     CACALCIUM ION H - 94
1gu6_A_741gu6   A     HECHEME C H - 94
1gu6_A_741gu6   A     HECHEME C A - 95
1gu6_A_741gu6   A     HECHEME C F - 96
1gu6_A_741gu6   A     CACALCIUM ION A - 97
1gu6_A_741gu6   A     HECHEME C A - 97
1gu6_A_741gu6   A     HECHEME C V - 98
1gu6_A_741gu6   A     CACALCIUM ION D - 100
1gu6_A_741gu6   A     HECHEME C D - 100
1gu6_A_741gu6   A     CACALCIUM ION V - 101
1gu6_A_741gu6   A     HECHEME C V - 101
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 108
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 111
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 112
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 113
1oah_A_991oah   A     CACALCIUM ION N - 113
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 114
1oah_A_991oah   A     CACALCIUM ION E - 114
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 115
1oah_A_991oah   A     CACALCIUM ION T - 115
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 116
1oah_A_991oah   A     CACALCIUM ION R - 116
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 117
1oah_A_991oah   A     CACALCIUM ION G - 117
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 118
1oah_A_991oah   A     CACALCIUM ION H - 118
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 119
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 120
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 121
1oah_A_991oah   A     CACALCIUM ION A - 121
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 122
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 124
1oah_A_991oah   A     CACALCIUM ION D - 124
1oah_A_991oah   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 125
1oah_A_991oah   A     CACALCIUM ION F - 125
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 91
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 94
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 95
1qdb_A_811qdb   A     CACALCIUM ION N - 96
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 96
1qdb_A_811qdb   A     CACALCIUM ION S - 97
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 97
1qdb_A_811qdb   A     CACALCIUM ION P - 98
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 98
1qdb_A_811qdb   A     CACALCIUM ION R - 99
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 99
1qdb_A_811qdb   A     CACALCIUM ION G - 100
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 100
1qdb_A_811qdb   A     CACALCIUM ION H - 101
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 101
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 102
1qdb_A_811qdb   A     CACALCIUM ION A - 104
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 104
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 105
1qdb_A_811qdb   A     CACALCIUM ION D - 107
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 107
1qdb_A_811qdb   A     CACALCIUM ION N - 108
1qdb_A_811qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 108
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gu6_A_741gu6   A HA1HEC BINDING SITE FOR CHAIN AY - 88
1gu6_A_741gu6   A HA1HEC BINDING SITE FOR CHAIN AN - 89
1gu6_A_741gu6   A CA2CA BINDING SITE FOR CHAIN AP - 91
1gu6_A_741gu6   A HA3HEC BINDING SITE FOR CHAIN AR - 92
1gu6_A_741gu6   A HA3HEC BINDING SITE FOR CHAIN AG - 93
1gu6_A_741gu6   A HA3HEC BINDING SITE FOR CHAIN AH - 94
1gu6_A_741gu6   A HA3HEC BINDING SITE FOR CHAIN AF - 96
1gu6_A_741gu6   A HA3HEC BINDING SITE FOR CHAIN AA - 97
1oah_A_991oah   A BC6CL BINDING SITE FOR CHAIN AP - 107
1oah_A_991oah   A BC6CL BINDING SITE FOR CHAIN AF - 108
1oah_A_991oah   A AC1HEM BINDING SITE FOR CHAIN AY - 112
1oah_A_991oah   A AC7CA BINDING SITE FOR CHAIN AE - 114
1oah_A_991oah   A AC3HEM BINDING SITE FOR CHAIN AT - 115
1oah_A_991oah   A AC3HEM BINDING SITE FOR CHAIN AR - 116
1oah_A_991oah   A AC3HEM BINDING SITE FOR CHAIN AH - 118
1oah_A_991oah   A AC3HEM BINDING SITE FOR CHAIN AY - 120
1oah_A_991oah   A AC3HEM BINDING SITE FOR CHAIN AA - 121
1oah_A_991oah   A AC3HEM BINDING SITE FOR CHAIN AD - 124

Clusters included in this Subclass
CLUSTER: HH.17.5