Information on SUBCLASS 16.4.1 |
Subclass Accession number: 5166
Subclass: 16.4.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7 (>75 %) 2.7.3 (>75 %) 2.7.3.25.3 (>75 %) 5.3.1 (>75 %) 5.3.1.5 GO : GO:0000287 (>50 %) GO:0003676 (>50 %) GO:0003677 (>50 %) GO:0004111 (>75 %) GO:0004518 (>50 %) GO:0004519 (>50 %) GO:0009045 (>50 %) GO:0016301 (>75 %) GO:0016772 (>75 %) GO:0016775 (>75 %) GO:0016788 (>50 %) GO:0016853 (>50 %) GO:0016860 (>50 %) GO:0016861 (>50 %) SCOP : 48033 (>75 %) 48034 (>75 %) 48035 (>75 %) 51658 (>75 %) 51665 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 91.1 +/- -19.7 Average RMSD (Å) : 0.275 +/- 0.050 Consensus geometry
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Consensus Sequence: | VDNPGHPhIMTVGCVAGDEE |
(φψ)-conformation: | aabaebaabpbalbbbabaa |
Pattern: | [LV] | [D] | [D] | [IV] | [I] | [Q] | [T] | [G] | [V] | [D] | [N] | [P] | [G] | [H] | [P] | [FY] | [I] | [M] | [T] | [V] | [G] | [C] | [V] | [A] | [G] | [D] | [E] | [E] | [CS] | [Y] | [DET] | [V] |
Conservation: | -1.689 | 0.534 | 0.534 | -1.054 | -0.738 | -0.102 | -0.102 | 0.534 | -0.738 | 0.534 | 0.534 | 1.169 | 0.534 | 1.805 | 1.169 | -0.273 | -0.738 | -0.102 | -0.102 | -0.738 | 0.534 | 2.440 | -0.738 | -0.738 | 0.534 | 0.534 | -0.102 | -0.102 | -1.619 | 1.169 | -2.143 | -0.738 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g0w_A_53 | 1g0w | A | 53 | 84 | VDDVIQTGVDNPGHPYIMTVGCVAGDEESYDV | HHHHHHHHHH----SS--B-----SSTTHHHH | aaaaaaaaaabaebaabxbavbbxabaaaaaa |
1n16_A_53 | 1n16 | A | 53 | 84 | LDDIIQTGVDNPGHPFIMTVGCVAGDEECYEV | HHHHHHHHHH----SSS-B-----SSTTHHHH | aaaaaaaaaabaebaabbxavbbbabaaaaaa |
1qh4_A_53 | 1qh4 | A | 53 | 84 | LDDVIQTGVDNPGHPFIMTVGCVAGDEESYEV | HHHHHHHHHH----SSS-B-----SSTTHHHH | aaaaaaaaaabaebaaxxbavbbxabaaaaaa |
2crk_A_53 | 2crk | A | 53 | 84 | LDDVIQTGVDNPGHPFIMTVGCVAGDEESYTV | HHHHHHHHHH---BTTB-B-----SSSTHHHH | aaaaaaaaaabaebaabxbavbbbabaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | M - 70 |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | T - 71 |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | V - 72 |
1qh4_A_53 | 1qh4 | A | ACTACETATE ION | G - 73 |
Clusters included in this Subclass |
CLUSTER: HH.17.4 |