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Information on SUBCLASS 16.5.1
Subclass Accession number: 5167
Subclass: 16.5.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004857 (>75 %)  GO:0004866 (>75 %)  GO:0030414 (>75 %)  
SCOP : 48207 (>75 %)  48239 (>75 %)  48251 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 57.4 +/- -1.0
Average RMSD (Å) : 0.200 +/- 0.100

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XFpphXXXhAAhXpRXXSTW
(φψ)-conformation: aappaalpbbabaapppbaa
Pattern: [KR][DQ]x[A][LV][DE][L][I][KQ][K][G][Y][MT][QR]xx[AQ][F][KR][KQ][AP]x[GS][AS][FY][A][A][FW]x[KNS][R][ADP][PS][S][T][W][L][T][A][FY][V]x[KR][V][FL][S][L]
Conservation:0.003-0.413-1.2100.261-0.5270.1120.2610.261-0.2600.7911.3211.851-0.785-0.260-1.421-1.206-0.9431.3210.034-0.260-0.581-1.622-0.570-0.5270.7640.2610.2610.556-1.622-0.8570.791-1.328-0.5810.2610.7913.9700.2610.7910.2610.6900.261-1.5050.0340.261-0.4750.2610.261
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c3d_*_491c3d   -4995RQGALELIKKGYTQQLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSLHHHHHHHHHHHHHHHHTTB-TTS-B-SSTTS---HHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaxxaavxbbabaaxxxbaaaaaaaaaaaaa
1hzf_A_10221hzf   A10231069KDHAVDLIQKGYMRIQQFRKADGSYAAWLSRDSSTWLTAFVLKVLSLHHHHHHHHHHHHHHHHTTB-TTS-B-SSTTS---HHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaxxaavxbbabaaxxxbaaaaaaaaaaaaa
1qqf_A_10421qqf   A10421088RQEALELIKKGYTQQLAFKQPISAYAAFNNRPPSTWLTAYVSRVFSLHHHHHHHHHHHHHHHHTTB-TTS-B-SSTTS---HHHHHHHHHHHHHaaaaaaaaaaaaaaaaaaxxaavxbbabaaxpxxaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c3d_*_491c3d   *     GOLGLYCEROL S - 82
1c3d_*_491c3d   *     GOLGLYCEROL T - 83
1c3d_*_491c3d   *     GOLGLYCEROL W - 84
1c3d_*_491c3d   *     GOLGLYCEROL L - 85
1hzf_A_10221hzf   A     MSESELENOMETHIONINE I - 1037
1hzf_A_10221hzf   A     MSESELENOMETHIONINE W - 1058
1hzf_A_10221hzf   A     MSESELENOMETHIONINE L - 1059
1hzf_A_10221hzf   A     MSESELENOMETHIONINE F - 1062
1hzf_A_10221hzf   A     MSESELENOMETHIONINE V - 1063
1hzf_A_10221hzf   A     MSESELENOMETHIONINE V - 1066
1hzf_A_10221hzf   A     MSESELENOMETHIONINE L - 1067
1qqf_A_10421qqf   A     CSOS-HYDROXYCYSTEINE Q - 1056
1qqf_A_10421qqf   A     CSOS-HYDROXYCYSTEINE F - 1059
1qqf_A_10421qqf   A     CSOS-HYDROXYCYSTEINE A - 1067
1qqf_A_10421qqf   A     CSOS-HYDROXYCYSTEINE A - 1068
1qqf_A_10421qqf   A     CSOS-HYDROXYCYSTEINE F - 1069

Clusters included in this Subclass
CLUSTER: HH.17.9