Information on SUBCLASS 16.5.1 |
Subclass Accession number: 5167
Subclass: 16.5.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004857 (>75 %) GO:0004866 (>75 %) GO:0030414 (>75 %) SCOP : 48207 (>75 %) 48239 (>75 %) 48251 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 57.4 +/- -1.0 Average RMSD (Å) : 0.200 +/- 0.100 Consensus geometry
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Consensus Sequence: | XFpphXXXhAAhXpRXXSTW |
(φψ)-conformation: | aappaalpbbabaapppbaa |
Pattern: | [KR] | [DQ] | x | [A] | [LV] | [DE] | [L] | [I] | [KQ] | [K] | [G] | [Y] | [MT] | [QR] | x | x | [AQ] | [F] | [KR] | [KQ] | [AP] | x | [GS] | [AS] | [FY] | [A] | [A] | [FW] | x | [KNS] | [R] | [ADP] | [PS] | [S] | [T] | [W] | [L] | [T] | [A] | [FY] | [V] | x | [KR] | [V] | [FL] | [S] | [L] |
Conservation: | 0.003 | -0.413 | -1.210 | 0.261 | -0.527 | 0.112 | 0.261 | 0.261 | -0.260 | 0.791 | 1.321 | 1.851 | -0.785 | -0.260 | -1.421 | -1.206 | -0.943 | 1.321 | 0.034 | -0.260 | -0.581 | -1.622 | -0.570 | -0.527 | 0.764 | 0.261 | 0.261 | 0.556 | -1.622 | -0.857 | 0.791 | -1.328 | -0.581 | 0.261 | 0.791 | 3.970 | 0.261 | 0.791 | 0.261 | 0.690 | 0.261 | -1.505 | 0.034 | 0.261 | -0.475 | 0.261 | 0.261 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c3d_*_49 | 1c3d | - | 49 | 95 | RQGALELIKKGYTQQLAFRQPSSAFAAFVKRAPSTWLTAYVVKVFSL | HHHHHHHHHHHHHHHHTTB-TTS-B-SSTTS---HHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaxxaavxbbabaaxxxbaaaaaaaaaaaaa |
1hzf_A_1022 | 1hzf | A | 1023 | 1069 | KDHAVDLIQKGYMRIQQFRKADGSYAAWLSRDSSTWLTAFVLKVLSL | HHHHHHHHHHHHHHHHTTB-TTS-B-SSTTS---HHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaxxaavxbbabaaxxxbaaaaaaaaaaaaa |
1qqf_A_1042 | 1qqf | A | 1042 | 1088 | RQEALELIKKGYTQQLAFKQPISAYAAFNNRPPSTWLTAYVSRVFSL | HHHHHHHHHHHHHHHHTTB-TTS-B-SSTTS---HHHHHHHHHHHHH | aaaaaaaaaaaaaaaaaaxxaavxbbabaaxpxxaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c3d_*_49 | 1c3d | * | GOLGLYCEROL | S - 82 |
1c3d_*_49 | 1c3d | * | GOLGLYCEROL | T - 83 |
1c3d_*_49 | 1c3d | * | GOLGLYCEROL | W - 84 |
1c3d_*_49 | 1c3d | * | GOLGLYCEROL | L - 85 |
1hzf_A_1022 | 1hzf | A | MSESELENOMETHIONINE | I - 1037 |
1hzf_A_1022 | 1hzf | A | MSESELENOMETHIONINE | W - 1058 |
1hzf_A_1022 | 1hzf | A | MSESELENOMETHIONINE | L - 1059 |
1hzf_A_1022 | 1hzf | A | MSESELENOMETHIONINE | F - 1062 |
1hzf_A_1022 | 1hzf | A | MSESELENOMETHIONINE | V - 1063 |
1hzf_A_1022 | 1hzf | A | MSESELENOMETHIONINE | V - 1066 |
1hzf_A_1022 | 1hzf | A | MSESELENOMETHIONINE | L - 1067 |
1qqf_A_1042 | 1qqf | A | CSOS-HYDROXYCYSTEINE | Q - 1056 |
1qqf_A_1042 | 1qqf | A | CSOS-HYDROXYCYSTEINE | F - 1059 |
1qqf_A_1042 | 1qqf | A | CSOS-HYDROXYCYSTEINE | A - 1067 |
1qqf_A_1042 | 1qqf | A | CSOS-HYDROXYCYSTEINE | A - 1068 |
1qqf_A_1042 | 1qqf | A | CSOS-HYDROXYCYSTEINE | F - 1069 |
Clusters included in this Subclass |
CLUSTER: HH.17.9 |