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Information on SUBCLASS 24.1.1
Subclass Accession number: 5179
Subclass: 24.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.7 (>75 %)  1.7 (>75 %)  1.7.2 (>75 %)  1.7.2 (>75 %)  1.7.2.21.7.2.2
GO : GO:0005509 (>75 %)  GO:0005509 (>75 %)  GO:0016661 (>75 %)  GO:0016661 (>75 %)  GO:0016662 (>75 %)  GO:0016662 (>75 %)  GO:0042279 (>75 %)  GO:0042279 (>75 %)  
SCOP : 48694 (>75 %)  48694 (>75 %)  48695 (>75 %)  48695 (>75 %)  48711 (>75 %)  48711 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 69.9 +/- -23.3
Average RMSD (Å) : 0.133 +/- 0.058

Consensus geometry
d (Å): 17 delta (°): 135-180 theta (°): 45-90 rho (°): 45-90
Consensus Sequence: XppLRTGAPXchppGPLPXACWpCKSPD
(φψ)-conformation: aapaaaebpabaabeabpaaaaaaabaa
Pattern: [A][LV][QT][D][NV]x[EN][ST][L][R][T][G][A][P][KV][DN][AG][EK][DT][G][P][L][P]x[A][C][W][ST][C][K][S][P][D][V][AP][R][IL][I][EQ][EKQ][D]
Conservation:-0.160-0.811-1.0260.712-1.429-1.566-0.684-0.647-0.1600.2760.2760.712-0.1601.148-1.368-0.373-0.856-0.592-0.9320.7121.148-0.1601.148-1.323-0.1602.0212.893-0.6862.0210.276-0.1601.1480.712-0.160-0.8710.276-0.585-0.160-0.375-0.7900.712
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fs7_A_1051fs7   A105145ALQDNINTLRTGAPVDGKTGPLPSACWTCKSPDVPRIIEQDHHHHHHHSGGG---SSTT-SSSBGGGGTTT-THHHHHHHHHaaaaaaapaaaebxabaabeabxaaaaaaabaaaaaaaaaa
1gu6_A_971gu6   A97137AVTDVRETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDHHHHHHH-GGG---SSTT-SSSBGGGGTTT-THHHHHHHHHaaaaaaapaaaebpabaaxeabxaaaaaaabaaaaaaaaaa
1qdb_A_1041qdb   A104144ALQDNVNSLRTGAPVDAKTGPLPTACWTCKSPDVPRLIEEDHHHHHHHSGGG---SSTT-SSSBGGGGTTT-THHHHHHHHHaaaaaaaxaaaebxabaabeabwaaaaaaabaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 105
1fs7_A_1051fs7   A     CACALCIUM ION A - 105
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 106
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 108
1fs7_A_1051fs7   A     CACALCIUM ION D - 108
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 109
1fs7_A_1051fs7   A     CACALCIUM ION N - 109
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 112
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 114
1fs7_A_1051fs7   A     CACALCIUM ION R - 114
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 115
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 126
1fs7_A_1051fs7   A     CACALCIUM ION L - 126
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 127
1fs7_A_1051fs7   A     CACALCIUM ION P - 127
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 129
1fs7_A_1051fs7   A     CACALCIUM ION A - 129
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 130
1fs7_A_1051fs7   A     CACALCIUM ION C - 130
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 131
1fs7_A_1051fs7   A     CACALCIUM ION W - 131
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 132
1fs7_A_1051fs7   A     CACALCIUM ION T - 132
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 133
1fs7_A_1051fs7   A     CACALCIUM ION C - 133
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 134
1fs7_A_1051fs7   A     CACALCIUM ION K - 134
1fs7_A_1051fs7   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 135
1fs7_A_1051fs7   A     CACALCIUM ION S - 135
1gu6_A_971gu6   A     CACALCIUM ION A - 97
1gu6_A_971gu6   A     HECHEME C A - 97
1gu6_A_971gu6   A     HECHEME C V - 98
1gu6_A_971gu6   A     CACALCIUM ION D - 100
1gu6_A_971gu6   A     HECHEME C D - 100
1gu6_A_971gu6   A     CACALCIUM ION V - 101
1gu6_A_971gu6   A     HECHEME C V - 101
1gu6_A_971gu6   A     HECHEME C T - 104
1gu6_A_971gu6   A     CACALCIUM ION R - 106
1gu6_A_971gu6   A     HECHEME C R - 106
1gu6_A_971gu6   A     CACALCIUM ION T - 107
1gu6_A_971gu6   A     HECHEME C T - 107
1gu6_A_971gu6   A     CACALCIUM ION L - 118
1gu6_A_971gu6   A     HECHEME C L - 118
1gu6_A_971gu6   A     CACALCIUM ION P - 119
1gu6_A_971gu6   A     HECHEME C P - 119
1gu6_A_971gu6   A     CACALCIUM ION A - 121
1gu6_A_971gu6   A     HECHEME C A - 121
1gu6_A_971gu6   A     CACALCIUM ION C - 122
1gu6_A_971gu6   A     HECHEME C C - 122
1gu6_A_971gu6   A     CACALCIUM ION W - 123
1gu6_A_971gu6   A     HECHEME C W - 123
1gu6_A_971gu6   A     CACALCIUM ION S - 124
1gu6_A_971gu6   A     HECHEME C S - 124
1gu6_A_971gu6   A     CACALCIUM ION C - 125
1gu6_A_971gu6   A     HECHEME C C - 125
1gu6_A_971gu6   A     CACALCIUM ION K - 126
1gu6_A_971gu6   A     HECHEME C K - 126
1gu6_A_971gu6   A     CACALCIUM ION S - 127
1gu6_A_971gu6   A     HECHEME C S - 127
1qdb_A_1041qdb   A     CACALCIUM ION A - 104
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 104
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 105
1qdb_A_1041qdb   A     CACALCIUM ION D - 107
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 107
1qdb_A_1041qdb   A     CACALCIUM ION N - 108
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 108
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 111
1qdb_A_1041qdb   A     CACALCIUM ION R - 113
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 113
1qdb_A_1041qdb   A     CACALCIUM ION T - 114
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 114
1qdb_A_1041qdb   A     CACALCIUM ION L - 125
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 125
1qdb_A_1041qdb   A     CACALCIUM ION P - 126
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 126
1qdb_A_1041qdb   A     CACALCIUM ION A - 128
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 128
1qdb_A_1041qdb   A     CACALCIUM ION C - 129
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 129
1qdb_A_1041qdb   A     CACALCIUM ION W - 130
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 130
1qdb_A_1041qdb   A     CACALCIUM ION T - 131
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 131
1qdb_A_1041qdb   A     CACALCIUM ION C - 132
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 132
1qdb_A_1041qdb   A     CACALCIUM ION K - 133
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 133
1qdb_A_1041qdb   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 134
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gu6_A_971gu6   A HA3HEC BINDING SITE FOR CHAIN AA - 97
1gu6_A_971gu6   A HA1HEC BINDING SITE FOR CHAIN AT - 104
1gu6_A_971gu6   A HA1HEC BINDING SITE FOR CHAIN AR - 106
1gu6_A_971gu6   A HA1HEC BINDING SITE FOR CHAIN AK - 126

Clusters included in this Subclass
CLUSTER: HH.24.1