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Information on SUBCLASS 0.1.2
Subclass Accession number: 5189
Subclass: 0.1.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 37

Average sequence ID (%) : 6.9 +/- 12.3
Average RMSD (Å) : 0.465 +/- 0.164

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: pXXX
(φψ)-conformation: aabb
Pattern: xx[adegknqrst]xxx
Conservation:-1.061-0.5011.792-0.5160.371-0.085
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aop_*_4261aop   -427432QRENSMHHHTEEaaaabb
1b0u_A_851b0u   A9196LRTRLTHHHHEEaaaabb
1b9h_A_3501b9h   A355360ISSDCVHHHHEEaaaaxb
1c1k_A_1811c1k   A193198YRKILNHHHHEEaaaaxx
1cf3_A_1331cf3   A140145SLQAERHHHHEEaaaaxb
1cxy_A_721cxy   A7883LQRYLIHHHTEEaaaapa
1dl2_A_4511dl2   A464469FENTCVHHHHEEaaaaxb
1e4y_A_1151e4y   A119124RIVGRRHHHTEEaaaabb
1e6y_B_20301e6y   B20382043DTKRSVHHHHEEaaaabb
1eg5_A_3421eg5   A344349IAQGAIHHHHEEaaaaxb
1elj_A_961elj   A99104QDAMQYHHHTEEaaaabb
1fp3_A_2381fp3   A239244CLGRHQHHHHEEaaaaxb
1g6s_A_4161g6s   A420425LARISQHHHHEEaaaaxb
1grj_*_461grj   -6873KLSNAQHHHHEEaaaapb
1gz3_A_3341gz3   A337342AQKKIWHHHTEEaaaabb
1hbn_B_331hbn   B4146GIKRTVHHHHEEaaaabb
1hc7_A_3771hc7   A400405REDHTRHHHTEEaaaabb
1hnn_A_1401hnn   A147152LRARVKHHHHEEaaaaxa
1ivy_A_2021ivy   A209214QTHCCSHHHHEEaaaabb
1j32_A_2231j32   A225230AYERSVHHHTEEaaaabb
1j7n_A_331j7n   A4045MKHIVKHHHHEEaaaabb
1lp8_A_2091lp8   A216221IFGDCKHHHSEEaaaabb
1mh3_A_911mh3   A9499WDAVRYHHHTEEaaaabb
1mrj_*_431mrj   -4348GSQRYAHHHHEEaaaabb
1nd7_A_8091nd7   A812817WQRNTVHHHTEEaaaabb
1nhd_A_1481nhd   A148153DNDMIIHHHHEEaaaaxx
1nlf_A_961nlf   A102107VADGLLHHHHEEaaaabb
1nm8_A_3661nm8   A382387MIQDLDHHHHEEaaaaxb
1nxc_A_5641nxc   A578583ESHCRVHHHTEEaaaaxb
1o0s_A_3501o0s   A353358ACNRIYHHHTEEaaaabb
1p1j_A_4381p1j   A455460FCTRVSHHHTEEaaaabb
1pzx_A_1431pzx   A153158YCRHMEHHHTEEaaaaxb
1qi7_A_2081qi7   A215220IYGDAKHHHHEEaaaabb
1tca_*_131tca   -1621LDAGLTHHHTEEaaaabb
1un8_A_1721un8   A182187AASNTFHHHTEEaaaabb
2pva_A_1162pva   A122127KLTSYTHHTTEEaaaabb
3thi_A_933thi   A96101LQGAKRHHHTEEaaaabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aop_*_4261aop   *     SRMSIROHEME A - 433
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 72
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 73
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 74
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 77
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 78
1cxy_A_721cxy   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 81
1e4y_A_1151e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE R - 119
1e4y_A_1151e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE I - 120
1e4y_A_1151e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE G - 122
1e4y_A_1151e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE R - 123
1e4y_A_1151e4y   A     AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE R - 124
1gz3_A_3341gz3   A     ATPADENOSINE-5'-TRIPHOSPHATE F - 344
1gz3_A_3341gz3   A     ATPADENOSINE-5'-TRIPHOSPHATE D - 345
1j32_A_2231j32   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 233
1j32_A_2231j32   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 234
1nxc_A_5641nxc   A     NAGN-ACETYL-D-GLUCOSAMINE W - 569
1o0s_A_3501o0s   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE M - 360
1o0s_A_3501o0s   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE D - 361
1p1j_A_4381p1j   A     PO4PHOSPHATE ION D - 438
1p1j_A_4381p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE D - 438
1p1j_A_4381p1j   A     CRYPROPANE-1,2,3-TRIOL D - 438
1p1j_A_4381p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE S - 439
1p1j_A_4381p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 441
1p1j_A_4381p1j   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE A - 442
1pzx_A_1431pzx   A     PLMPALMITIC ACID H - 159
1pzx_A_1431pzx   A     PLMPALMITIC ACID F - 161
1qi7_A_2081qi7   A     SULSULFATE ANION R - 209
1qi7_A_2081qi7   A     SULSULFATE ANION K - 210
1qi7_A_2081qi7   A     SULSULFATE ANION T - 213
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e4y_A_1151e4y   A AC1AP5 BINDING SITE FOR CHAIN AR - 119
1e4y_A_1151e4y   A AC1AP5 BINDING SITE FOR CHAIN AR - 123

Clusters included in this Subclass
CLUSTER: HE.1.5
CLUSTER: HE.2.163