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PDB code:

Information on SUBCLASS 0.1.21

Subclass Accession number: 5208 Subclass: 0.1.21 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 9 Average sequence ID (%) : 11.5 +/- 13.4 Average RMSD (Å) : 0.644 +/- 0.133 Consensus geometry d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bxy_A_41	1bxy	A	44	57	RGNVEKVAHLVRVE	HHHHHHTTTTEEEE	aaaaaaaaaabbbb
1g8m_A_128	1g8m	A	133	146	LRAAAKNHARVTVV	HHHHHHTTTT-EEE	aaaaaaaaaaxxbb
1gyt_A_200	1gyt	A	208	221	RQLADSYSKNVITR	HHHHHHTTTTEEEE	aaaaaaaaaabbbb
1jf8_A_16	1jf8	A	22	35	GWGKEILGEGWNVY	HHHHHHSTTTEEEE	aaaaaaaaaabxbb
1m4l_A_15	1m4l	A	23	36	DLLVAEHPQLVSKL	HHHHHH-TTTEEEE	aaaaaaaaaabbbb
1nm1_A_55	1nm1	A	55	68	GDEAQSKRGILTLK	HHHHHHTTTTEEEE	eaaaaaaaaabbxb
1obr_*_12	1obr	-	20	33	NTVASNYPNIVKKF	HHHHHH-TTTEEEE	aaaaaaaaaabbxb
1pox_A_38	1pox	A	41	54	MDALSAERDRIHYI	HHHHHHTTTTSEEE	aaaaaaaaaabbxb
1thx_*_35	1thx	-	43	56	NLAANTYSDRLKVV	HHHHHHTTTT-EEE	aaaaaaaaaabbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1g8m_A_128	1g8m	A	GGUANOSINE-5'-MONOPHOSPHATE	G - 128
1g8m_A_128	1g8m	A	GGUANOSINE-5'-MONOPHOSPHATE	G - 129
1g8m_A_128	1g8m	A	GGUANOSINE-5'-MONOPHOSPHATE	V - 130
1g8m_A_128	1g8m	A	GGUANOSINE-5'-MONOPHOSPHATE	L - 132
1g8m_A_128	1g8m	A	MSESELENOMETHIONINE	T - 144
1g8m_A_128	1g8m	A	GGUANOSINE-5'-MONOPHOSPHATE	T - 144
1jf8_A_16	1jf8	A	BCTBICARBONATE ION	R - 16
1jf8_A_16	1jf8	A	TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL	R - 16
1jf8_A_16	1jf8	A	BCTBICARBONATE ION	S - 17
1jf8_A_16	1jf8	A	BCTBICARBONATE ION	Q - 18
1nm1_A_55	1nm1	A	SO2SULFUR DIOXIDE	R - 62
1obr_*_12	1obr	*	CACALCIUM ION	E - 14

Clusters included in this Subclass

CLUSTER: HE.3.181

CLUSTER: HE.4.126

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