|
|
|
|
|
|
|
| Information on SUBCLASS 0.1.28 |
|
Subclass Accession number: 5215
Subclass: 0.1.28 
Type: HE alpha-beta DB: ArchDB95 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 6 Average sequence ID (%) : 10.6 +/- 11.6 Average RMSD (Å) : 0.750 +/- 0.105 Consensus geometry
|
| Consensus Sequence: | XXXX |
| (φψ)-conformation: | aabb |
| Pattern: | [anv] | x | [eknrt] | [AGKQS] | x | [aiv] | x | x | [ALMV] | [AGKS] | x | x | x | [dpqr] | [ITV] | x | [FIKV] |
| Conservation: | -0.009 | -0.944 | -0.430 | 0.405 | -0.957 | 0.486 | -0.530 | -1.209 | 1.531 | 0.992 | -0.269 | -1.053 | -0.331 | -0.203 | 2.641 | -0.393 | 0.272 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1bxy_A_41 | 1bxy | A | 42 | 58 | AIRGNVEKVAHLVRVEV | HHHHHHHHTTTTEEEEE | aaaaaaaaaaaabbbbx |
| 1chu_A_18 | 1chu | A | 19 | 35 | AGLSLALRLADQHQVIV | HHHHHHHHHTTTS-EEE | aaaaaaaaaaaabbbbx |
| 1dih_*_108 | 1dih | - | 109 | 125 | AGKQAIRDAAADIAIVF | HHHHHHHHHTTTS-EEE | aaaaaaaaaaaabxbbb |
| 1dih_*_131 | 1dih | - | 139 | 155 | LLEKAAKVMGDYTDIEI | HHHHHHHHHTTTSEEEE | aaaaaaaaaaaaxxxbb |
| 1o17_A_90 | 1o17 | A | 90 | 106 | VSTASAILLSLVNPVAK | HHHHHHHHHTTTS-EEE | aaaaaaaaaaaabwbbx |
| 1qf9_A_95 | 1qf9 | A | 97 | 113 | NNNSWEENMKDFVDTKF | HHHHHHHHHTTT-EEEE | aaaaaaaaaaaabxxab |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1qf9_A_95 | 1qf9 | A | C5PCYTIDINE-5'-MONOPHOSPHATE | N - 97 |
| Clusters included in this Subclass |
| CLUSTER: HE.5.58 |
| For any comment or web-related incidence, send an email to the webmaster. |
|