Information on SUBCLASS 0.1.35 |
Subclass Accession number: 5222
Subclass: 0.1.35 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 15.0 +/- 14.2 Average RMSD (Å) : 0.480 +/- 0.084 Consensus geometry
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Consensus Sequence: | hDXp |
(φψ)-conformation: | aabb |
Pattern: | [ARST] | x | [CLV] | [EKQRS] | [EKQS] | x | [AVY] | [gp] | [DN] | [cdsy] | [nqty] | [ILV] | [fhrw] | [AFVY] |
Conservation: | -0.243 | -0.942 | 0.272 | 0.126 | 0.470 | -0.995 | 0.553 | 0.478 | 2.355 | -0.953 | -1.048 | 1.243 | -1.016 | -0.300 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a5z_*_109 | 1a5z | - | 125 | 138 | RNVSKYAPDSIVIV | HHHHHH-TT-EEEE | aaaaaaaaaxbbbx |
1kam_A_85 | 1kam | A | 90 | 103 | SLLKQRYPNDQLFF | HHHHHHSTTSEEEE | aaaaaaaaabbxbb |
1no5_A_11 | 1no5 | A | 19 | 32 | TILQQLVPDYTVWA | HHHHHH-TTSEEEE | aaaaaaaaabxbbx |
1rbl_M_80 | 1rbl | M | 88 | 101 | RECRSEYGDCYIRV | HHHHHH-TTSEEEE | aaaaaaaaabxbbx |
2dpm_A_244 | 2dpm | A | 244 | 257 | ALVEELYKDFNIHY | HHHHHHTTTSEEEE | aaaaaaaaabxxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a5z_*_109 | 1a5z | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 112 |
1a5z_*_109 | 1a5z | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 116 |
1a5z_*_109 | 1a5z | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 119 |
1a5z_*_109 | 1a5z | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | E - 122 |
1a5z_*_109 | 1a5z | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 123 |
1a5z_*_109 | 1a5z | * | OXMOXAMIC ACID | V - 138 |
1a5z_*_109 | 1a5z | * | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 138 |
1no5_A_11 | 1no5 | A | ZNZINC ION | F - 33 |
Clusters included in this Subclass |
CLUSTER: HE.3.164 |